RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 COX20Q5RI15 118 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 SFRP5Q5T4F7 317 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 C1QTNF12Q5T7M4 302 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 RNF220Q5VTB9 566 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 SHEQ5VZ18 495 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 ABLIM2Q6H8Q1 611 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 ZNF550Q7Z398 422 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 NUFIP2Q7Z417 695 aaKnown RBP10.52□□□□□ -0.73
VRK1-204ENST00000555351 ADGRG3Q86Y34 549 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 ATP6V1C2Q8NEY4 427 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 PIGXQ8TBF5 258 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 HSD17B8Q92506 261 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 CNOT9Q92600 299 aaKnown RBP10.52□□□□□ -0.73
VRK1-204ENST00000555351 GTF2H4Q92759 462 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 PIK3IP1Q96FE7 263 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 TMEM204Q9BSN7 226 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 ARMC7Q9H6L4 198 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 C12orf49Q9H741 205 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 BCL2L10Q9HD36 194 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 TCF7L2Q9NQB0 619 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 CTPS2Q9NRF8 586 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 SLC6A13Q9NSD5 602 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 EMC3Q9P0I2 261 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 ABCA4P78363 2273 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 RAI1Q7Z5J4 1906 aaPredicted RBP10.51□□□□□ -0.73
VRK1-204ENST00000555351 A0A096LPI6 279 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.51□□□□□ -0.73
VRK1-204ENST00000555351 CDHR4A6H8M9 788 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 CFAP73A6NFT4 308 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 ARHGEF9O43307 516 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 BCAS1O75363 584 aaPredicted RBP10.51□□□□□ -0.73
VRK1-204ENST00000555351 C1QCP02747 245 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 PPIBP23284 216 aaKnown RBP10.51□□□□□ -0.73
VRK1-204ENST00000555351 RYKP34925 604 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 IDH2P48735 452 aaKnown RBP10.51□□□□□ -0.73
VRK1-204ENST00000555351 ATP4BP51164 291 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 DSTNP60981 165 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 ADAM8P78325 824 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 H3F3AP84243 136 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 LARS2Q15031 903 aaKnown RBP10.51□□□□□ -0.73
VRK1-204ENST00000555351 MAPK11Q15759 364 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 LIN52Q52LA3 116 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 LRIF1Q5T3J3 769 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 MRPL2Q5T653 305 aaKnown RBP10.51□□□□□ -0.73
VRK1-204ENST00000555351 ADAM5Q6NVV9 412 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 BLOC1S3Q6QNY0 202 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 PRSS57Q6UWY2 283 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 C22orf34Q6ZV56 151 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 HDXQ7Z353 690 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 GALNT5Q7Z7M9 940 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 P2RY8Q86VZ1 359 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 CXorf67Q86X51 503 aaPredicted RBP10.51□□□□□ -0.73
VRK1-204ENST00000555351 PNPT1Q8TCS8 783 aaKnown RBP10.51□□□□□ -0.73
VRK1-204ENST00000555351 SLC38A5Q8WUX1 472 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 DDIT4LQ96D03 193 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 ADAM19Q9H013 955 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 PAIP1Q9H074 479 aaKnown RBP10.51□□□□□ -0.73
VRK1-204ENST00000555351 PIF1Q9H611 641 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 ARGLU1Q9NWB6 273 aaPredicted RBP10.51□□□□□ -0.73
VRK1-204ENST00000555351 TMEM181Q9P2C4 612 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 ZNF232Q9UNY5 417 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 IFT52Q9Y366 437 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 MED13LQ71F56 2210 aa10.51□□□□□ -0.73
VRK1-204ENST00000555351 TMED7-TICAM2A0A0A6YYA0 188 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 CLDN24A6NM45 220 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 ZNF716A6NP11 495 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 ZNF814B7Z6K7 855 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 ADAM11O75078 769 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 FESP07332 822 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 TFPIP10646 304 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 ETFAP13804 333 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 PAX1P15863 534 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 HOXB9P17482 250 aaPredicted RBP10.5□□□□□ -0.73
VRK1-204ENST00000555351 COX5AP20674 150 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 IL32P24001 234 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 CRATP43155 626 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 IDH3AP50213 366 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 SLC35A1P78382 337 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 EPS8Q12929 822 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 RGNQ15493 299 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 C6orf10Q5SRN2 563 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 ANKRD34AQ69YU3 496 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 GOLGA6L1Q8N7Z2 621 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 OR9I1Q8NGQ6 314 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 OR52P1PQ8NH57 321 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 IGFBPL1Q8WX77 278 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 KISS1RQ969F8 398 aaPredicted RBP10.5□□□□□ -0.73
VRK1-204ENST00000555351 VPS33AQ96AX1 596 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 S100PBPQ96BU1 408 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 ZC3HAV1LQ96H79 300 aaKnown RBP10.5□□□□□ -0.73
VRK1-204ENST00000555351 ARL5BQ96KC2 179 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 SPATA9Q9BWV2 254 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 POTEKPQ9BYX7 375 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 CACYBPQ9HB71 228 aaKnown RBP10.5□□□□□ -0.73
VRK1-204ENST00000555351 A4GALTQ9NPC4 353 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 DLL4Q9NR61 685 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 OSGIN1Q9UJX0 560 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 TMED7Q9Y3B3 224 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 PCDHB14Q9Y5E9 798 aa10.5□□□□□ -0.73
VRK1-204ENST00000555351 IGHV3-15A0A0B4J1V0 119 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms