RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 OCA2Q04671 838 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 SSX1Q16384 188 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 SLC29A4Q7RTT9 530 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 ARMC10Q8N2F6 343 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 OR2T33Q8NG76 320 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 DNAJA4Q8WW22 397 aaPredicted RBP8.13□□□□□ -1.11
TDP1-210ENST00000554976 TMEM80Q96HE8 168 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 OPALINQ96PE5 141 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 GPX7Q96SL4 187 aaPredicted RBP8.13□□□□□ -1.11
TDP1-210ENST00000554976 NEURL2Q9BR09 285 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 CCDC90BQ9GZT6 254 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 ZNF700Q9H0M5 742 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 GPR52Q9Y2T5 361 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 RPL36Q9Y3U8 105 aaKnown RBP8.13□□□□□ -1.11
TDP1-210ENST00000554976 PCDHGA3Q9Y5H0 932 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 KNL1Q8NG31 2342 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 PMS2P1A4D2B8 440 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 SCDO00767 359 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 EIF4E2O60573 245 aaKnown RBP8.12□□□□□ -1.11
TDP1-210ENST00000554976 PPM1BO75688 479 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 ZNF806P0C7X5 589 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 EVI2BP34910 448 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 INSM1Q01101 510 aaPredicted RBP8.12□□□□□ -1.11
TDP1-210ENST00000554976 PLCXD2Q0VAA5 305 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 NXNL2Q5VZ03 156 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 MARCH3Q86UD3 253 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 BBS1Q8NFJ9 593 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 VMP1Q96GC9 406 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 IMMP1LQ96LU5 166 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 HCAR1Q9BXC0 346 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 HINT3Q9NQE9 182 aaKnown RBP8.12□□□□□ -1.11
TDP1-210ENST00000554976 IL20RAQ9UHF4 553 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 CLEC2DQ9UHP7 191 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 MRTO4Q9UKD2 239 aaKnown RBP8.12□□□□□ -1.11
TDP1-210ENST00000554976 R4GN57 208 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 EFCAB9A8MZ26 197 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 SOCS6O14544 535 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 TERTO14746 1132 aaKnown RBP8.12□□□□□ -1.11
TDP1-210ENST00000554976 ASAH2BP0C7U1 165 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 COX6A1P12074 109 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 HTR1FP30939 366 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 ETV1P50549 477 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 EMP2P54851 167 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 LTBQ06643 244 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 RAB40BQ12829 278 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 SNAPC1Q16533 368 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 KIF26BQ2KJY2 2108 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 C3orf38Q5JPI3 329 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 CLEC12AQ5QGZ9 265 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 NAXDQ8IW45 347 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 ZNF614Q8N883 585 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 GAL3ST4Q96RP7 486 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 CMC2Q9NRP2 79 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 PMF1-BGLAPU3KQ54 211 aa8.12□□□□□ -1.11
TDP1-210ENST00000554976 TRAV27A0A087WT01 109 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 IGLV3-32A0A0A0MS00 114 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 KPNA4O00629 521 aaPredicted RBP8.11□□□□□ -1.11
TDP1-210ENST00000554976 NPIPB7O75200 414 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 OR7A10O76100 309 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 ZNF12P17014 697 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 UQCRC1P31930 480 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 SLC9A3P48764 834 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 NUBP1P53384 320 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 CTAG1AP78358 180 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 FOXK2Q01167 660 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 TOMM34Q15785 309 aaPredicted RBP8.11□□□□□ -1.11
TDP1-210ENST00000554976 FAM69BQ5VUD6 431 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 NIPAL3Q6P499 406 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 FAM199XQ6PEV8 388 aaPredicted RBP8.11□□□□□ -1.11
TDP1-210ENST00000554976 PAPD4Q6PIY7 484 aaKnown RBP8.11□□□□□ -1.11
TDP1-210ENST00000554976 PAQR6Q6TCH4 344 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 C16orf47Q6ZP98 133 aaPredicted RBP8.11□□□□□ -1.11
TDP1-210ENST00000554976 GATSQ8NAP1 163 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 TBC1D15Q8TC07 691 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 SYNDIG1Q9H7V2 258 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 NXT1Q9UKK6 140 aaKnown RBP8.11□□□□□ -1.11
TDP1-210ENST00000554976 BDP1A6H8Y1 2624 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 CCDC160A6NGH7 325 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 RAB36O95755 333 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 NAGAP17050 411 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 CCNA2P20248 432 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 SLC6A8P48029 635 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 ZNF74Q16587 644 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 TIGD6Q17RP2 521 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 CCDC81Q6ZN84 652 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 STX19Q8N4C7 294 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 ESX1Q8N693 406 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 LRRC17Q8N6Y2 441 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 DYNC2LI1Q8TCX1 351 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 PTP4A1Q93096 173 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 RNFT2Q96EX2 444 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 FRMD6Q96NE9 622 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 TNFRSF13CQ96RJ3 184 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 CENPOQ9BU64 300 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 PTDSS2Q9BVG9 487 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 SLC7A5P2Q9GIP4 190 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 OSGIN1Q9UJX0 560 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 NPFFR2Q9Y5X5 522 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 SDK2Q58EX2 2172 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 TEX51A0A1B0GUA7 166 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms