RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 TMEM229AB2RXF0 380 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 EEF1E1-BLOC1S5C9J1V9 151 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 M0R3H8 397 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 NME4O00746 187 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 DVL2O14641 736 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 EEF1E1O43324 174 aaKnown RBP11.04□□□□□ -0.64
SYNE2-214ENST00000554928 RAMP1O60894 148 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 IL18BPO95998 194 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 IMPDH2P12268 514 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 APOBEC1P41238 236 aaKnown RBP11.04□□□□□ -0.64
SYNE2-214ENST00000554928 SLC1A3P43003 542 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 RBBP4Q09028 425 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 NPTX1Q15818 432 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 SYT14P1Q58G82 188 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 LUZP2Q86TE4 346 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 TSPYL5Q86VY4 417 aaPredicted RBP11.04□□□□□ -0.64
SYNE2-214ENST00000554928 MED12LQ86YW9 2145 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 RBM45Q8IUH3 476 aaKnown RBP11.04□□□□□ -0.64
SYNE2-214ENST00000554928 ARMC8Q8IUR7 673 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 SLC15A3Q8IY34 581 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 CNEP1R1Q8N9A8 125 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 PCYOX1LQ8NBM8 494 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 ABHD3Q8WU67 409 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 C3orf49Q96BT1 292 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 SFXN3Q9BWM7 321 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 ENKD1Q9H0I2 346 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 OPN3Q9H1Y3 402 aaPredicted RBP11.04□□□□□ -0.64
SYNE2-214ENST00000554928 MRGBPQ9NV56 204 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 CHRNA9Q9UGM1 479 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 ING1Q9UK53 422 aaPredicted RBP11.04□□□□□ -0.64
SYNE2-214ENST00000554928 PACSIN3Q9UKS6 424 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 ZNF232Q9UNY5 417 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 ARL2BPQ9Y2Y0 163 aa11.04□□□□□ -0.64
SYNE2-214ENST00000554928 FBN2P35556 2912 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 SMAD9O15198 467 aaKnown RBP11.03□□□□□ -0.64
SYNE2-214ENST00000554928 SHOX2O60902 331 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-214ENST00000554928 SYNGR4O95473 234 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 NPPAP01160 153 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 CGAP01215 116 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 FESP07332 822 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 TFPIP10646 304 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 TNFRSF1BP20333 461 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 PTNP21246 168 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 EDNRAP25101 427 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 SLC7A1P30825 629 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 UQCRC1P31930 480 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 OPRM1P35372 400 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 DIO1P49895 249 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 ASCL1P50553 236 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 NUDT2P50583 147 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 POLR2HP52434 150 aaKnown RBP11.03□□□□□ -0.64
SYNE2-214ENST00000554928 SLC7A2P52569 658 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 MYBPHQ13203 477 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 MEX3BQ6ZN04 569 aaKnown RBP11.03□□□□□ -0.64
SYNE2-214ENST00000554928 ZNF550Q7Z398 422 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 ATG4DQ86TL0 474 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-214ENST00000554928 KRT73Q86Y46 540 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 ZNF440Q8IYI8 595 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 ZNF295-AS1Q8N0V1 137 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 RNF128Q8TEB7 428 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 ZNF775Q96BV0 537 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-214ENST00000554928 REXO5Q96IC2 774 aaKnown RBP11.03□□□□□ -0.64
SYNE2-214ENST00000554928 ARHGDIGQ99819 225 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 ECSITQ9BQ95 431 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 PRRG4Q9BZD6 226 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 SERINC1Q9NRX5 453 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 GID8Q9NWU2 228 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 STOML1Q9UBI4 398 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 UNC79Q9P2D8 2635 aa11.03□□□□□ -0.64
SYNE2-214ENST00000554928 CRYBG3Q68DQ2 2970 aa11.02□□□□□ -0.64
SYNE2-214ENST00000554928 INTS1Q8N201 2190 aaKnown RBP11.02□□□□□ -0.65
SYNE2-214ENST00000554928 A0A1B0GWA3 101 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 GJE1A6NN92 205 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 FAM220BPB1ANY3 271 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 SS18L1O75177 396 aaPredicted RBP11.02□□□□□ -0.65
SYNE2-214ENST00000554928 SMNDC1O75940 238 aaKnown RBP eCLIP11.02□□□□□ -0.65
SYNE2-214ENST00000554928 KCNJ5P48544 419 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 LIPEQ05469 1076 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 PDSS1Q5T2R2 415 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 WBP2NLQ6ICG8 309 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 ZNF474Q6S9Z5 364 aaPredicted RBP11.02□□□□□ -0.65
SYNE2-214ENST00000554928 TMPPEQ6ZT21 453 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 CCDC80Q76M96 950 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 FCRLAQ7L513 359 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 NUFIP2Q7Z417 695 aaKnown RBP11.02□□□□□ -0.65
SYNE2-214ENST00000554928 P3H2Q8IVL5 708 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 VANGL1Q8TAA9 524 aaPredicted RBP11.02□□□□□ -0.65
SYNE2-214ENST00000554928 CPNE4Q96A23 557 aaPredicted RBP11.02□□□□□ -0.65
SYNE2-214ENST00000554928 ZFP3Q96NJ6 502 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 ZNF300Q96RE9 604 aaPredicted RBP11.02□□□□□ -0.65
SYNE2-214ENST00000554928 ZNF607Q96SK3 696 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 SPATA5L1Q9BVQ7 753 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 CACYBPQ9HB71 228 aaKnown RBP11.02□□□□□ -0.65
SYNE2-214ENST00000554928 CHST11Q9NPF2 352 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 ADAM21Q9UKJ8 722 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 MCTS1Q9ULC4 181 aaKnown RBP11.02□□□□□ -0.65
SYNE2-214ENST00000554928 CELSR2Q9HCU4 2923 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 HCFC1P51610 2035 aa11.02□□□□□ -0.65
SYNE2-214ENST00000554928 IGKV1D-42A0A075B6H8 117 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 A8MXE2 369 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms