RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 FCGR3AP08637 254 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 HSD17B1P14061 328 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 GP9P14770 177 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 PRDX6P30041 224 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 AKT2P31751 481 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 YWHABP31946 246 aaKnown RBP1.2□□□□□ -2.22
PRPF39-208ENST00000554785 MAGEA4P43358 317 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 QARSP47897 775 aaKnown RBP1.2□□□□□ -2.22
PRPF39-208ENST00000554785 SLC6A8P48029 635 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 ACADVLP49748 655 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 PGFP49763 221 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 SLC7A2P52569 658 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 MYBPC1Q00872 1141 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 IL1RL1Q01638 556 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 NCBP1Q09161 790 aaKnown RBP1.2□□□□□ -2.22
PRPF39-208ENST00000554785 SLC1A5Q15758 541 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 CDKN3Q16667 212 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 PCK2Q16822 640 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 LINC00303Q3SY05 128 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 PRR30Q53SZ7 412 aaPredicted RBP1.2□□□□□ -2.22
PRPF39-208ENST00000554785 VWA2Q5GFL6 755 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 ZNF506Q5JVG8 444 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 IL23RQ5VWK5 629 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 LIPKQ5VXJ0 399 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 REP15Q6BDI9 236 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 SLC8B1Q6J4K2 584 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 FAM159AQ6UWV7 190 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 DPY19L2P2Q6ZN68 376 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 TMEM26Q6ZUK4 368 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 LUZP1Q86V48 1076 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 LRRC49Q8IUZ0 686 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 PYROXD2Q8N2H3 581 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 OR10T2Q8NGX3 314 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 OR4Q3Q8NH05 313 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 OR2L2Q8NH16 312 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 HTR3CQ8WXA8 447 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 TOMM40LQ969M1 308 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 NTNG2Q96CW9 530 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 RBM18Q96H35 190 aaKnown RBP1.2□□□□□ -2.22
PRPF39-208ENST00000554785 FAM111AQ96PZ2 611 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 CPXM1Q96SM3 734 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 C19orf43Q9BQ61 176 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 PYGO2Q9BRQ0 406 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 TCHPQ9BT92 498 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 NLNQ9BYT8 704 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 POLR3FQ9H1D9 316 aaPredicted RBP1.2□□□□□ -2.22
PRPF39-208ENST00000554785 C1orf21Q9H246 121 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 HSD3B7Q9H2F3 369 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 NRN1Q9NPD7 142 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 RPS10P5Q9NQ39 176 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 NRBP2Q9NSY0 501 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 CNOT2Q9NZN8 540 aaKnown RBP1.2□□□□□ -2.22
PRPF39-208ENST00000554785 MIOXQ9UGB7 285 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 CIDEBQ9UHD4 219 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 IKZF3Q9UKT9 509 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 EMCNQ9ULC0 261 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 PLA2G4CQ9UP65 541 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 CA5BQ9Y2D0 317 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 SLC9A8Q9Y2E8 581 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 PLEKHA6Q9Y2H5 1048 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 KLHDC2Q9Y2U9 406 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 CACNA1CQ13936 2221 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 COL6A5A8TX70 2615 aa1.2□□□□□ -2.22
PRPF39-208ENST00000554785 PRRC2AP48634 2157 aaKnown RBP1.2□□□□□ -2.22
PRPF39-208ENST00000554785 SONP18583 2426 aaKnown RBP1.2□□□□□ -2.22
PRPF39-208ENST00000554785 FBN1P35555 2871 aaKnown RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 NPIPA5A0A0B4J1W7 369 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 FOXI3A8MTJ6 420 aaPredicted RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 NPIPA5E9PKD4 350 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 K7EM74 188 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 K7ENP7 123 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 RASGRF2O14827 1237 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 MCF2LO15068 1137 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 TRAPPC3O43617 180 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 BUB1O43683 1085 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 SLC37A4O43826 429 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 TNFSF15O95150 251 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 LDOC1O95751 146 aaPredicted RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 NUDT14O95848 222 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 GOT2P00505 430 aaKnown RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 RENP00797 406 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 TGFAP01135 160 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 APODP05090 189 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 MELTFP08582 738 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ZCCHC18P0CG32 403 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CXCL8P10145 99 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 RALAP11233 206 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 GATA1P15976 413 aaPredicted RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ACADSP16219 412 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 IL4RP24394 825 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 UCP1P25874 307 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 RPA1P27694 616 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 HOXA6P31267 233 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ASMTP46597 345 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 RABIFP47224 123 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 TPMTP51580 245 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 SGSHP51688 502 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 RAG2P55895 527 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 C21orf59P57076 290 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 SLC8A3P57103 927 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms