RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 MXRA5Q9NR99 2828 aa4.32□□□□□ -1.72
ATXN3-228ENST00000554592 CHD3Q12873 2000 aaKnown RBP4.31□□□□□ -1.72
ATXN3-228ENST00000554592 SCN3AQ9NY46 2000 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 A0A1W2PPH5 198 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 GAGE10A6NGK3 116 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 RTCAO00442 366 aaKnown RBP4.31□□□□□ -1.72
ATXN3-228ENST00000554592 UBFD1O14562 309 aaKnown RBP4.31□□□□□ -1.72
ATXN3-228ENST00000554592 TSPAN4O14817 238 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 CLGNO14967 610 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 SCELO95171 688 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 AIFM1O95831 613 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 FTCDO95954 541 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 HLA-DQA2P01906 255 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 CLPSP04118 112 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 CHRM4P08173 479 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 SLC35E2BP0CK96 405 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 SLC35E2P0CK97 266 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 CDKN1AP38936 164 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 CASP2P42575 452 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 MAGEA6P43360 314 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 CASP9P55211 416 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 CDKN2DP55273 166 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 RPS13P62277 151 aaKnown RBP4.31□□□□□ -1.72
ATXN3-228ENST00000554592 SIRPAP78324 504 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 NRF1Q16656 503 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 EXOC3L2Q2M3D2 409 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 PAGE2BQ5JRK9 111 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 SEL1L2Q5TEA6 688 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 OR4C11Q6IEV9 310 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 EXOC3L1Q86VI1 746 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 PLCZ1Q86YW0 608 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 SPC24Q8NBT2 197 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 MCUQ8NE86 351 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 LILRB1Q8NHL6 650 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-228ENST00000554592 SGMS2Q8NHU3 365 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 NFKBIDQ8NI38 313 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 RDH11Q8TC12 318 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 FIG4Q92562 907 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 UBE2E3Q969T4 207 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 ADIPOR1Q96A54 375 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 WDR34Q96EX3 536 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 C11orf24Q96F05 449 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-228ENST00000554592 EGFL8Q99944 293 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 NTMT1Q9BV86 223 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 OR10A4Q9H209 315 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 RNF122Q9H9V4 155 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 CXorf21Q9HAI6 301 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 XAB2Q9HCS7 855 aaKnown RBP4.31□□□□□ -1.72
ATXN3-228ENST00000554592 NGBQ9NPG2 151 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 DNAJC11Q9NVH1 559 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 PPP1R14DQ9NXH3 145 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 NLKQ9UBE8 527 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 HEY2Q9UBP5 337 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 PHF11Q9UIL8 331 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 ZNF175Q9Y473 711 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 RNF115Q9Y4L5 304 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 SNX8Q9Y5X2 465 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 USF3Q68DE3 2245 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 HEATR5BQ9P2D3 2071 aa4.31□□□□□ -1.72
ATXN3-228ENST00000554592 HRNRQ86YZ3 2850 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-228ENST00000554592 IGHV4-30-2A0A087WSY4 118 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 A0A087X0M5 115 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 A0A096LNT2 108 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 A0A1B0GX30 115 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 A0A1W2PP18 115 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 CLOCKO15516 846 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 SSX4O60224 188 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 ZIC3O60481 467 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 NDUFS7O75251 213 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 CCDC175P0C221 793 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 SLC25A16P16260 332 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 IL11P20809 199 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 HNF1AP20823 631 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 PTGDSP41222 190 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 SSR2P43308 183 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 KCNJ1P48048 391 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 CCR9P51686 369 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 ARFIP1P53367 373 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 HMGCS1Q01581 520 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 TNFRSF17Q02223 184 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 KIF5AQ12840 1032 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 DOC2AQ14183 400 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 GUSBP1Q15486 140 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 PPP1R3AQ16821 1122 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 PGGHGQ32M88 737 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 CEP78Q5JTW2 689 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 ADNP2Q6IQ32 1131 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 CLEC2AQ6UVW9 174 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 STAC2Q6ZMT1 411 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 MEX3DQ86XN8 651 aaKnown RBP4.3□□□□□ -1.72
ATXN3-228ENST00000554592 PRR22Q8IZ63 422 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 TCAIMQ8N3R3 496 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 ZCCHC7Q8N3Z6 543 aaKnown RBP4.3□□□□□ -1.72
ATXN3-228ENST00000554592 RFLNBQ8N5W9 214 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 ARIH2OSQ8N7S6 290 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 ZNF615Q8N8J6 731 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 STEAP2Q8NFT2 490 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 OR7G1Q8NGA0 311 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 OR6K3Q8NGY3 331 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 RAB3IL1Q8TBN0 382 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms