RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 TUBAL3A6NHL2 446 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 H0YL77 283 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 POLR1CO15160 346 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-211ENST00000554437 CFLARO15519 480 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 DUX1O43812 170 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 NUDT14O95848 222 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 MBP02144 154 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 S100A6P06703 90 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 PLEKP08567 350 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-211ENST00000554437 SLC35G4P0C7Q5 338 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 HSMCR30P0CW71 290 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 PPIAL4FP0DN26 164 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 POU2F1P14859 743 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 ZNF3P17036 446 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 TNNI1P19237 187 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 CASP14P31944 242 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 CASP4P49662 377 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 ARHGDIAP52565 204 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 CDH6P55285 790 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 DAOAP59103 153 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 RAB11AP62491 216 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 XIAPP98170 497 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 OTUD4Q01804 1114 aaKnown RBP3.8□□□□□ -1.8
SCFD1-211ENST00000554437 BST2Q10589 180 aaKnown RBP3.8□□□□□ -1.8
SCFD1-211ENST00000554437 RAB11BQ15907 218 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 DMKNQ6E0U4 476 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-211ENST00000554437 OR4F3Q6IEY1 312 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 SSX9Q7RTT3 188 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 CD302Q8IX05 232 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 C11orf53Q8IXP5 236 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 LINC00469Q8N7U9 141 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 STXBP6Q8NFX7 210 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 OR4K14Q8NGD5 310 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 OR4D5Q8NGN0 318 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 PAQR8Q8TEZ7 354 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 ASZ1Q8WWH4 475 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 SLC38A4Q969I6 547 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 MYLPFQ96A32 169 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 ZBED3Q96IU2 234 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-211ENST00000554437 AMDHD1Q96NU7 426 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 RANBP9Q96S59 729 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 COPS8Q99627 209 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 C19orf43Q9BQ61 176 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 ANKRD60Q9BZ19 345 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 C8orf33Q9H7E9 229 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-211ENST00000554437 TREM1Q9NP99 234 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 CHMP5Q9NZZ3 219 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 GNG12Q9UBI6 72 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 FZR1Q9UM11 496 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 KLHDC2Q9Y2U9 406 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 PPIAL4AQ9Y536 164 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 AKNAQ7Z591 1439 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 A0A0A6YYD4 124 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 IGKV6D-41A0A0C4DH26 115 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 TRABD2BA6NFA1 517 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 C12orf71A8MTZ7 269 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 SAP18O00422 153 aaKnown RBP3.79□□□□□ -1.8
SCFD1-211ENST00000554437 N4BP1O75113 896 aaKnown RBP3.79□□□□□ -1.8
SCFD1-211ENST00000554437 CLPXO76031 633 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 H6PDO95479 791 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 OAS1P00973 400 aaKnown RBP3.79□□□□□ -1.8
SCFD1-211ENST00000554437 CST1P01037 141 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 GSTA1P08263 222 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 NEFHP12036 1026 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 KLK2P20151 261 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 SGSHP51688 502 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 TPM4P67936 248 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 NOP14P78316 857 aaKnown RBP3.79□□□□□ -1.8
SCFD1-211ENST00000554437 ASPHQ12797 758 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 COTL1Q14019 142 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 STK38Q15208 465 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 PPP1R3AQ16821 1122 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 ZNF699Q32M78 642 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 GGTA1PQ4G0N0 100 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 HSP90AA4PQ58FG1 418 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 LIPNQ5VXI9 398 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 TMEM220Q6QAJ8 160 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 C6orf89Q6UWU4 347 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 Q7L0L9 218 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 ACOT1Q86TX2 421 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 ERO1BQ86YB8 467 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 ALLCQ8N6M5 410 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 ASCC1Q8N9N2 400 aaKnown RBP3.79□□□□□ -1.8
SCFD1-211ENST00000554437 OR51G2Q8NGK0 314 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 CLHC1Q8NHS4 586 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 NANPQ8TBE9 248 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 MRAPQ8TCY5 172 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 CRYGNQ8WXF5 182 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 ELMO1Q92556 727 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 LHX4Q969G2 390 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 TM4SF19Q96DZ7 209 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 PELI1Q96FA3 418 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 TGS1Q96RS0 853 aaKnown RBP3.79□□□□□ -1.8
SCFD1-211ENST00000554437 C20orf24Q9BUV8 137 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 FBXO44Q9H4M3 255 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 NRN1Q9NPD7 142 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 POLE4Q9NR33 117 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 TNFRSF19Q9NS68 423 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 AHSPQ9NZD4 102 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 VANGL2Q9ULK5 521 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms