RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 ALG2Q9H553 416 aa16.58■□□□□ 0.24
CPSF2-203ENST00000554290 KCNK9Q9NPC2 374 aa16.58■□□□□ 0.24
CPSF2-203ENST00000554290 CISD1Q9NZ45 108 aaKnown RBP16.58■□□□□ 0.24
CPSF2-203ENST00000554290 BTNL2Q9UIR0 455 aa16.58■□□□□ 0.24
CPSF2-203ENST00000554290 HAO1Q9UJM8 370 aa16.58■□□□□ 0.24
CPSF2-203ENST00000554290 MAGED1Q9Y5V3 778 aaPredicted RBP16.58■□□□□ 0.24
CPSF2-203ENST00000554290 CIB4A0PJX0 185 aa16.57■□□□□ 0.24
CPSF2-203ENST00000554290 PGM3O95394 542 aa16.57■□□□□ 0.24
CPSF2-203ENST00000554290 EDNRAP25101 427 aa16.57■□□□□ 0.24
CPSF2-203ENST00000554290 CDKN1AP38936 164 aa16.57■□□□□ 0.24
CPSF2-203ENST00000554290 TXNL4AP83876 142 aaKnown RBP16.57■□□□□ 0.24
CPSF2-203ENST00000554290 FUT5Q11128 374 aa16.57■□□□□ 0.24
CPSF2-203ENST00000554290 FAPQ12884 760 aa16.57■□□□□ 0.24
CPSF2-203ENST00000554290 PGGHGQ32M88 737 aa16.57■□□□□ 0.24
CPSF2-203ENST00000554290 OGFOD2Q6N063 350 aa16.57■□□□□ 0.24
CPSF2-203ENST00000554290 PRIMA1Q86XR5 153 aa16.57■□□□□ 0.24
CPSF2-203ENST00000554290 ADGRG3Q86Y34 549 aa16.57■□□□□ 0.24
CPSF2-203ENST00000554290 CMIPQ8IY22 773 aa16.57■□□□□ 0.24
CPSF2-203ENST00000554290 ZNF433Q8N7K0 673 aaPredicted RBP16.57■□□□□ 0.24
CPSF2-203ENST00000554290 CCDC115Q96NT0 180 aa16.57■□□□□ 0.24
CPSF2-203ENST00000554290 TRNT1Q96Q11 434 aaKnown RBP16.57■□□□□ 0.24
CPSF2-203ENST00000554290 GRIP2Q9C0E4 1043 aa16.57■□□□□ 0.24
CPSF2-203ENST00000554290 MEAF6Q9HAF1 191 aa16.57■□□□□ 0.24
CPSF2-203ENST00000554290 HIVEP2P31629 2446 aa16.57■□□□□ 0.24
CPSF2-203ENST00000554290 USF3Q68DE3 2245 aa16.57■□□□□ 0.24
CPSF2-203ENST00000554290 CCT8L1PA6NM43 557 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 ZNF716A6NP11 495 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 RNF223E7ERA6 249 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 HMGN4O00479 90 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 RAMP1O60894 148 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 BCAS1O75363 584 aaPredicted RBP16.56■□□□□ 0.24
CPSF2-203ENST00000554290 MRPL33O75394 65 aaKnown RBP16.56■□□□□ 0.24
CPSF2-203ENST00000554290 BGNP21810 368 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 MAGEA8P43361 318 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 IDH2P48735 452 aaKnown RBP16.56■□□□□ 0.24
CPSF2-203ENST00000554290 OR2B6P58173 313 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 CHRNEQ04844 493 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 LRRC74AQ0VAA2 488 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 GNA13Q14344 377 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 TMEM108Q6UXF1 575 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 PMM1Q92871 262 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 ARL5BQ96KC2 179 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 HS6ST2Q96MM7 605 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 PANX1Q96RD7 426 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 REG4Q9BYZ8 158 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 SLCO5A1Q9H2Y9 848 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 BARX1Q9HBU1 254 aaPredicted RBP16.56■□□□□ 0.24
CPSF2-203ENST00000554290 ASB6Q9NWX5 421 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 TMEM181Q9P2C4 612 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 TRAPPC4Q9Y296 219 aa16.56■□□□□ 0.24
CPSF2-203ENST00000554290 ZANQ9Y493 2812 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 CCDC154A6NI56 674 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 SHISA9B4DS77 424 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 ABCD4O14678 606 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 RAD51DO75771 328 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 IGHV3-9P01782 118 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 CCNA2P20248 432 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 SLC16A1P53985 500 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 CDH11P55287 796 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 OR7E24Q6IFN5 339 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 KLHL17Q6TDP4 642 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 SPATA19Q7Z5L4 167 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 HMGN2P46Q86SG4 172 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 RNF130Q86XS8 419 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 CNOT9Q92600 299 aaKnown RBP16.55■□□□□ 0.24
CPSF2-203ENST00000554290 DDIT4LQ96D03 193 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 PAIP2Q9BPZ3 127 aaKnown RBP16.55■□□□□ 0.24
CPSF2-203ENST00000554290 TRAF4Q9BUZ4 470 aaPredicted RBP16.55■□□□□ 0.24
CPSF2-203ENST00000554290 OR11A1Q9GZK7 315 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 MTHFD2LQ9H903 347 aaPredicted RBP16.55■□□□□ 0.24
CPSF2-203ENST00000554290 PNPOQ9NVS9 261 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 PARPBPQ9NWS1 579 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 TAS2R16Q9NYV7 291 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.55■□□□□ 0.24
CPSF2-203ENST00000554290 MGAT4BQ9UQ53 548 aa16.55■□□□□ 0.24
CPSF2-203ENST00000554290 V9GYY5 206 aaPredicted RBP16.55■□□□□ 0.24
CPSF2-203ENST00000554290 FREM1Q5H8C1 2179 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 PRR14LQ5THK1 2151 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 GOLGA8QA0A0J9YX86 632 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 GOLGA8OA6NCC3 632 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 AGAP5A6NIR3 686 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 CLDN24A6NM45 220 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 GOLGA8NF8WBI6 632 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 EIF1BO60739 113 aaKnown RBP16.54■□□□□ 0.24
CPSF2-203ENST00000554290 TP53P04637 393 aaPredicted RBP16.54■□□□□ 0.24
CPSF2-203ENST00000554290 UQCRBP14927 111 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 ACVR1BP36896 505 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 POLR2HP52434 150 aaKnown RBP16.54■□□□□ 0.24
CPSF2-203ENST00000554290 MAP2K6P52564 334 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 NME5P56597 212 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 UFM1P61960 85 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 SLC35A1P78382 337 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 BST1Q10588 318 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 MPP2Q14168 576 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 SYPL1Q16563 259 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 HHATQ5VTY9 493 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 AGAP6Q5VW22 663 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 LRRC74BQ6ZQY2 392 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 ZNF621Q6ZSS3 439 aa16.54■□□□□ 0.24
CPSF2-203ENST00000554290 CROCCP2Q86T23 111 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms