RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 P2RY6Q15077 328 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 TAB1Q15750 504 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 PDK4Q16654 411 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 AP5B1Q2VPB7 878 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 TMEM249Q2WGJ8 235 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 FAM174BQ3ZCQ3 159 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 ARMC3Q5W041 872 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 SULT1C3Q6IMI6 304 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 LRRC8EQ6NSJ5 796 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 NIPAL1Q6NVV3 410 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 ADAM5Q6NVV9 412 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 SLC30A6Q6NXT4 461 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 SLC48A1Q6P1K1 146 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 MED27Q6P2C8 311 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 ENPP6Q6UWR7 440 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 C4orf22Q6V702 233 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 FAM57BQ71RH2 274 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 NUP54Q7Z3B4 507 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 GOLGA7Q7Z5G4 137 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 GALNT10Q86SR1 603 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 MARCH3Q86UD3 253 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 IFNEQ86WN2 208 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 GRAMD2AQ8IUY3 354 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 GABRG1Q8N1C3 465 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 NKAPQ8N5F7 415 aaKnown RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 METTL25Q8N6Q8 603 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 TEX9Q8N6V9 391 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 ZNF525Q8N782 197 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 L3MBTL4Q8NA19 623 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 TTLQ8NG68 377 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 OR7G2Q8NG99 324 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 OR14L1PQ8NHC6 308 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 GABPB2Q8TAK5 448 aaPredicted RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 UBTD2Q8WUN7 234 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 KCTD4Q8WVF5 259 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 TMEM158Q8WZ71 300 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 ANKRD7Q92527 254 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 ZNF75CPQ92670 426 aaPredicted RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 TAF15Q92804 592 aaKnown RBP eCLIP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 TANKQ92844 425 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 SPSB4Q96A44 273 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 S100PBPQ96BU1 408 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 C11orf24Q96F05 449 aaPredicted RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 ZBED6CLQ96FA7 236 aaPredicted RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 RBM18Q96H35 190 aaKnown RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 VSTM2LQ96N03 204 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 SFXN2Q96NB2 322 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 SECISBP2Q96T21 854 aaKnown RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 GPR22Q99680 433 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 MED18Q9BUE0 208 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 MRPL1Q9BYD6 325 aaKnown RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 ACTR6Q9GZN1 396 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 RHOJQ9H4E5 214 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 ESRP2Q9H6T0 727 aaKnown RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 ALG9Q9H6U8 611 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 COPS7BQ9H9Q2 264 aaPredicted RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 FOLH1BQ9HBA9 442 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 XAB2Q9HCS7 855 aaKnown RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 PSD3Q9NYI0 1048 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 COPS7AQ9UBW8 275 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 NKX1-2Q9UD57 310 aaPredicted RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 NDRG3Q9UGV2 375 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 EIF3LQ9Y262 564 aaKnown RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 MRPS33Q9Y291 106 aaKnown RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 DLGAP4Q9Y2H0 992 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 SIRT4Q9Y6E7 314 aaPredicted RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 TRRAPQ9Y4A5 3859 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 TLN2Q9Y4G6 2542 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 IGHV3-15A0A0B4J1V0 119 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 NPIPA5A0A0B4J1W7 369 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 IGHV4-61A0A0C4DH41 118 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 TMEM272A0A1B0GTI8 110 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 LOC102723971A0A1B0GUV8 181 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 FAM234BA2RU67 622 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 OR6C70A6NIJ9 312 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 SLC22A20A6NK97 555 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 FAM159BA6NKW6 160 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 EFCAB8A8MWE9 144 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 C9JVG2 144 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 NPIPA7E9PJI5 369 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 H0YIV9 168 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 K7EPI3 171 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 AP3B1O00203 1094 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 TP53I11O14683 189 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 TNFSF11O14788 317 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 PFDN6O15212 129 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 TLX2O43763 284 aaPredicted RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 CXCL13O43927 109 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 SS18L1O75177 396 aaPredicted RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 BCAS1O75363 584 aaPredicted RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 REM1O75628 298 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 SLU7O95391 586 aaKnown RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 PSMG1O95456 288 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 PDYNP01213 254 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 C1QCP02747 245 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 ALDOAP04075 364 aaKnown RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 ATP1B1P05026 303 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 NPIPA8P0DM63 369 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 PORP16435 677 aaPredicted RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms