RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 OR52J3Q8NH60 311 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 SFXN2Q96NB2 322 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 PRSS27Q9BQR3 290 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 ACKR4Q9NPB9 350 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 MGAT4BQ9UQ53 548 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 NTNG1Q9Y2I2 539 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 TMED7Q9Y3B3 224 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 CSAG2Q9Y5P2 127 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 FRYQ5TBA9 3013 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 ZFHX4Q86UP3 3567 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 TRBV4-1A0A0J9YWV2 114 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 PINLYPA6NC86 204 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 SAC3D1A6NKF1 404 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 OR2T1O43869 369 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 TRAPPC6AO75865 159 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 LYPD3O95274 346 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 AHSA1O95433 338 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 PDGFAP04085 211 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 GSTM3P21266 225 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 CHMP24386 653 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 CD97P48960 835 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 TMEM44Q2T9K0 475 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 LINC00303Q3SY05 128 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 OGFRL1Q5TC84 451 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-210ENST00000553950 FBXW10Q5XX13 1052 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 SLC6A19Q695T7 634 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 LINC00114Q6XXX2 140 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 STK32CQ86UX6 486 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 TMEM251Q8N6I4 163 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 ATG16L2Q8NAA4 619 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 OR6S1Q8NH40 331 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 TMEM255BQ8WV15 326 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 WBP1Q96G27 269 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 RDH12Q96NR8 316 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 CIB1Q99828 191 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 FUZQ9BT04 418 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 PRR14Q9BWN1 585 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 ZDHHC11Q9H8X9 412 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 NTN4Q9HB63 628 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 VNN3Q9NY84 501 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 PDP1Q9P0J1 537 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-210ENST00000553950 HRH3Q9Y5N1 445 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 ACACBO00763 2458 aa13.13□□□□□ -0.31
SHMT2-210ENST00000553950 TRAV36DV7A0A075B6V5 113 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 A0A087WUU8 490 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 FAM166BA8MTA8 275 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 B4DXG7 233 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 HCN1O60741 890 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 MT-ATP6P00846 226 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 THY1P04216 161 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 PEX2P28328 305 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 GTF2E2P29084 291 aaKnown RBP13.12□□□□□ -0.31
SHMT2-210ENST00000553950 MAGEA5P43359 124 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 ALDH3A2P51648 485 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 RAD23AP54725 363 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 CTBP2P56545 445 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 ALDH6A1Q02252 535 aaKnown RBP13.12□□□□□ -0.31
SHMT2-210ENST00000553950 DAG1Q14118 895 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 SLC10A1Q14973 349 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 SYT14P1Q58G82 188 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 FAM180AQ6UWF9 173 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 ZBTB49Q6ZSB9 765 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 EPHX4Q8IUS5 362 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 NKAIN4Q8IVV8 208 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 DGCR6LQ9BY27 220 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 POTEKPQ9BYX7 375 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 USE1Q9NZ43 259 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 NKX1-2Q9UD57 310 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-210ENST00000553950 POFUT2Q9Y2G5 429 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 HDGFL3Q9Y3E1 203 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 AP4B1Q9Y6B7 739 aa13.12□□□□□ -0.31
SHMT2-210ENST00000553950 OR2M5A3KFT3 312 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 DNPH1O43598 174 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 ZIC3O60481 467 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 ACTL6AO96019 429 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 RFPL3SP0C7P2 107 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 POU3F2P20265 443 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-210ENST00000553950 IGFBP5P24593 272 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 FPR3P25089 353 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 VHLP40337 213 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 HSPA13P48723 471 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 SLC9A3P48764 834 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 IST1P53990 364 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 NUP107P57740 925 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 RAC1P63000 192 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 PRKCDQ05655 676 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 CRYZQ08257 329 aaKnown RBP13.11□□□□□ -0.31
SHMT2-210ENST00000553950 COX10Q12887 443 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 ANKDD1AQ495B1 522 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 OTUD3Q5T2D3 398 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-210ENST00000553950 PDSS1Q5T2R2 415 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 FAM69AQ5T7M9 428 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 RPL13AP3Q6NVV1 102 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 FAHD1Q6P587 224 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 POMZP3Q6PJE2 187 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 WDR88Q6ZMY6 472 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 ADGRG3Q86Y34 549 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 NRMQ8IXM6 262 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 SLC43A2Q8N370 569 aa13.11□□□□□ -0.31
SHMT2-210ENST00000553950 TEX19Q8NA77 164 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms