RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 FLVCR2Q9UPI3 526 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 POLDIP2Q9Y2S7 368 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 NOSIPQ9Y314 301 aaKnown RBP1.88□□□□□ -2.11
SRP54-204ENST00000553923 MOB4Q9Y3A3 225 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 OARD1Q9Y530 152 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 KIF27Q86VH2 1401 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 PTPRUQ92729 1446 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 FGD5Q6ZNL6 1462 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 MYH15Q9Y2K3 1946 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 IGLV3-10A0A075B6K4 115 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 IQANK1A0A1B0GTG1 560 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 A0A1W2PPR1 153 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 ZNF840PA6NDX5 716 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 GABRR3A8MPY1 467 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 SERPINE3A8MV23 424 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 A8MXQ7 604 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 C11orf98E9PRG8 122 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 F5H6K3 240 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 HIP1O00291 1037 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 AIM2O14862 343 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 INPP4BO15327 924 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 RS1O15537 224 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 MAGEC1O60732 1142 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 TOM1O60784 492 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 RAMP3O60896 148 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 PDE5AO76074 875 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 SEC24AO95486 1093 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 OAS1P00973 400 aaKnown RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 MMP1P03956 469 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 GPIP06744 558 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 CLTAP09496 248 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 H2BFMP0C1H6 154 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 CCNB1P14635 433 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 PGCP20142 388 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 RRM2P31350 389 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 IFNA8P32881 189 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 SAA4P35542 130 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 IST1P53990 364 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 RIPK4P57078 832 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 YWHAGP61981 247 aaKnown RBP eCLIP1.87□□□□□ -2.11
SRP54-204ENST00000553923 YWHAEP62258 255 aaKnown RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 KCNJ2P63252 427 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 CSNK2BP67870 215 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 CDK16Q00536 496 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 KLRC3Q07444 240 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 SLAQ13239 276 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 XRCC4Q13426 336 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 COTL1Q14019 142 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 FAM189A2Q15884 450 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 MTHFSDQ2M296 383 aaKnown RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 TRIM16LQ309B1 348 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 SLC25A52Q3SY17 297 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 GLYR1Q49A26 553 aaPredicted RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 TMEM52BQ4KMG9 183 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 BEND3Q5T5X7 828 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 GPR157Q5UAW9 335 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 MLIPQ5VWP3 458 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 OR52W1Q6IF63 320 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 SLC25A25Q6KCM7 469 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 PRR5LQ6MZQ0 368 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 TMEM220Q6QAJ8 160 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 ADAMTSL5Q6ZMM2 481 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 LEKR1Q6ZMV7 388 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 GCNT7Q6ZNI0 430 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 LRRC74BQ6ZQY2 392 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 NIPA1Q7RTP0 329 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 PRSS48Q7RTY5 328 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 PTAR1Q7Z6K3 402 aaPredicted RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 MMAAQ8IVH4 418 aaKnown RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 OR4N5Q8IXE1 308 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 LSMEM2Q8N112 164 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 FAM58AQ8N1B3 248 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 LINC01561Q8N1V8 128 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 MARVELD2Q8N4S9 558 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 PROKR2Q8NFJ6 384 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 OR10A7Q8NGE5 316 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 OR4D6Q8NGJ1 314 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 OR4A4PQ8NGN8 299 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 OR1K1Q8NGR3 316 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 OR6F1Q8NGZ6 308 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 NDNFQ8TB73 568 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 DDI1Q8WTU0 396 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 PDCD6IPQ8WUM4 868 aaKnown RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 PIH1D2Q8WWB5 315 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 ANP32BQ92688 251 aaKnown RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 RAB1CQ92928 201 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 DLX4Q92988 240 aaPredicted RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 BIRC7Q96CA5 298 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 PLEKHA8Q96JA3 519 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 LURAP1Q96LR2 239 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 ZNF578Q96N58 590 aaPredicted RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 ZNF641Q96N77 438 aaPredicted RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 MTMR9Q96QG7 549 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 MAPKAP1Q9BPZ7 522 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 SLC30A2Q9BRI3 323 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 OVOL2Q9BRP0 275 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 GPR174Q9BXC1 333 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 NDEL1Q9GZM8 345 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 IL22Q9GZX6 179 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 MFFQ9GZY8 342 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms