RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 TNFSF11O14788 317 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 MSTNO14793 375 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 CXCL13O43927 109 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 FMO6PO60774 539 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 GCM2O75603 506 aaPredicted RBP8.37□□□□□ -1.07
CHD8-206ENST00000553870 PRKD3O94806 890 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 PMS2P2O95744 297 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 GKN3PP0CG01 181 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 CXCR1P25024 350 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 AGFG1P52594 562 aaKnown RBP8.37□□□□□ -1.07
CHD8-206ENST00000553870 TFF3Q07654 80 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 DMTNQ08495 405 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 KRT72Q14CN4 511 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 RNPS1Q15287 305 aaKnown RBP8.37□□□□□ -1.07
CHD8-206ENST00000553870 SPATS1Q496A3 300 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 SYT14P1Q58G82 188 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 C5orf46Q6UWT4 87 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 LIX1LQ8IVB5 337 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 ACBD4Q8NC06 268 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 CCDC197Q8NCU1 140 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 NAXEQ8NCW5 288 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 OR2T12Q8NG77 320 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 FNDC9Q8TBE3 224 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 SLC26A7Q8TE54 656 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 INTS12Q96CB8 462 aaKnown RBP8.37□□□□□ -1.07
CHD8-206ENST00000553870 GMPPAQ96IJ6 420 aaPredicted RBP8.37□□□□□ -1.07
CHD8-206ENST00000553870 OR5B2Q96R09 309 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 TACO1Q9BSH4 297 aaKnown RBP8.37□□□□□ -1.07
CHD8-206ENST00000553870 TRIM8Q9BZR9 551 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 UCK2Q9BZX2 261 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 TMEM185BQ9H7F4 350 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 TMEM27Q9HBJ8 222 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 TAGLN3Q9UI15 199 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 BAG5Q9UL15 447 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 TMED7Q9Y3B3 224 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 SPTAN1Q13813 2472 aaKnown RBP8.37□□□□□ -1.07
CHD8-206ENST00000553870 A0A1W2PNV4 684 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 A8MVM7 634 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 SULT2B1O00204 365 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 HNRNPRO43390 633 aaKnown RBP8.36□□□□□ -1.07
CHD8-206ENST00000553870 TPST1O60507 370 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 EIF1BO60739 113 aaKnown RBP8.36□□□□□ -1.07
CHD8-206ENST00000553870 SS18L1O75177 396 aaPredicted RBP8.36□□□□□ -1.07
CHD8-206ENST00000553870 TNFSF13O75888 250 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 OPN1LWP04000 364 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 FESP07332 822 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 TFPIP10646 304 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 PNMTP11086 282 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 BMP5P22003 454 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 SHC1P29353 583 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 AQP1P29972 269 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 KDELR2P33947 212 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 DIO1P49895 249 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 ASCL1P50553 236 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 NUDT2P50583 147 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 RGS8P57771 180 aaPredicted RBP8.36□□□□□ -1.07
CHD8-206ENST00000553870 PSME3P61289 254 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 LIPEQ05469 1076 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 FOXF2Q12947 444 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 PDK3Q15120 406 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 GUSBP1Q15486 140 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 CDSNQ15517 529 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 ZNF239Q16600 458 aaKnown RBP8.36□□□□□ -1.07
CHD8-206ENST00000553870 DUSP7Q16829 419 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 SWT1Q5T5J6 900 aaKnown RBP8.36□□□□□ -1.07
CHD8-206ENST00000553870 ULK3Q6PHR2 472 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 C6orf89Q6UWU4 347 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 FCRLAQ7L513 359 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 FAM214BQ7L5A3 538 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 RANBP3LQ86VV4 465 aaPredicted RBP8.36□□□□□ -1.07
CHD8-206ENST00000553870 KIF18BQ86Y91 864 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 MCEMP1Q8IX19 187 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 MICU2Q8IYU8 434 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 CADM2Q8N3J6 435 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 ATP6V1C2Q8NEY4 427 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 OR52E4Q8NGH9 312 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 STK35Q8TDR2 534 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 ZHX1-C8orf76Q96EF9 292 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 SLC47A1Q96FL8 570 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 KRTAP3-3Q9BYR6 98 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 KRTAP3-2Q9BYR7 98 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 POLR2J2Q9GZM3 115 aaKnown RBP8.36□□□□□ -1.07
CHD8-206ENST00000553870 POLR2J3Q9H1A7 115 aaKnown RBP8.36□□□□□ -1.07
CHD8-206ENST00000553870 PIF1Q9H611 641 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 COQ10BQ9H8M1 238 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 SPAG4Q9NPE6 437 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 PLSCR4Q9NRQ2 329 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 CMTM6Q9NX76 183 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 SELENONQ9NZV5 590 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 TMEM181Q9P2C4 612 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 ABCD2Q9UBJ2 740 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 RPS6KB2Q9UBS0 482 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 TESQ9UGI8 421 aaKnown RBP8.36□□□□□ -1.07
CHD8-206ENST00000553870 PACSIN3Q9UKS6 424 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 SLC9A8Q9Y2E8 581 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 EMC9Q9Y3B6 208 aa8.36□□□□□ -1.07
CHD8-206ENST00000553870 DOCK7Q96N67 2140 aa8.35□□□□□ -1.07
CHD8-206ENST00000553870 TMEM72A0PK05 275 aa8.35□□□□□ -1.07
CHD8-206ENST00000553870 CCT8L1PA6NM43 557 aa8.35□□□□□ -1.07
CHD8-206ENST00000553870 FAM90A27PA6NNH2 459 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms