RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 TPD52P55327 224 aaPredicted RBP12.45□□□□□ -0.42
TUBB3-202ENST00000553656 CARD18P57730 90 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 NUP107P57740 925 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 BNIP1Q12981 228 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 CEACAM7Q14002 265 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 ALG10BQ5I7T1 473 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 RTL6Q6ICC9 239 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 ULK3Q6PHR2 472 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 CBLL1Q75N03 491 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 ADGRG3Q86Y34 549 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 LSMEM1Q8N8F7 131 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 OR6T1Q8NGN1 323 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 SSC4DQ8WTU2 575 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 GEMIN6Q8WXD5 167 aaKnown RBP12.45□□□□□ -0.42
TUBB3-202ENST00000553656 NSMCE2Q96MF7 247 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 TM9SF2Q99805 663 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 THTPAQ9BU02 230 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 RSPO3Q9BXY4 272 aaPredicted RBP12.45□□□□□ -0.42
TUBB3-202ENST00000553656 ADAM19Q9H013 955 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 ZNF175Q9Y473 711 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 A0A0J9YW62 118 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 CPSF4LA6NMK7 179 aaKnown RBP12.44□□□□□ -0.42
TUBB3-202ENST00000553656 ARPC2O15144 300 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 EFNA2O43921 213 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 CXCL13O43927 109 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 PDE5AO76074 875 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 IL2RAP01589 272 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 SHC1P29353 583 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 MSX2P35548 267 aaPredicted RBP12.44□□□□□ -0.42
TUBB3-202ENST00000553656 TAS2R41P59536 307 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 CSNK2A1P68400 391 aaPredicted RBP12.44□□□□□ -0.42
TUBB3-202ENST00000553656 PON3Q15166 354 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 OR1Q1Q15612 314 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 CTU2Q2VPK5 515 aaKnown RBP12.44□□□□□ -0.42
TUBB3-202ENST00000553656 IFI44LQ53G44 452 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 SWT1Q5T5J6 900 aaKnown RBP12.44□□□□□ -0.42
TUBB3-202ENST00000553656 RIPPLY2Q5TAB7 128 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 ZNF613Q6PF04 617 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 DEF8Q6ZN54 512 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 RPRMLQ8N4K4 120 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 OSTF1Q92882 214 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 WNT2BQ93097 391 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 CPNE4Q96A23 557 aaPredicted RBP12.44□□□□□ -0.42
TUBB3-202ENST00000553656 C3orf49Q96BT1 292 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 ZHX1-C8orf76Q96EF9 292 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 SLC47A1Q96FL8 570 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 ZNF845Q96IR2 970 aaPredicted RBP12.44□□□□□ -0.42
TUBB3-202ENST00000553656 ADGRG7Q96K78 797 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 BTBD10Q9BSF8 475 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 PRR14Q9BWN1 585 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 MUC13Q9H3R2 512 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 GORASP2Q9H8Y8 452 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 C12orf10Q9HB07 376 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 CLCF1Q9UBD9 225 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 HDGFL3Q9Y3E1 203 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 MED12Q93074 2177 aa12.44□□□□□ -0.42
TUBB3-202ENST00000553656 A0A1W2PNR3 127 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 TMEM72A0PK05 275 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 MBD3L4A6NDZ8 208 aaPredicted RBP12.43□□□□□ -0.42
TUBB3-202ENST00000553656 MBD3L3A6NE82 208 aaPredicted RBP12.43□□□□□ -0.42
TUBB3-202ENST00000553656 MBD3L5A6NJ08 208 aaPredicted RBP12.43□□□□□ -0.42
TUBB3-202ENST00000553656 HSPB2A8KAH6 182 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 A8MVM7 634 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 SULT2B1O00204 365 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 EBAG9O00559 213 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 ZG16O60844 167 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 IFNW1P05000 195 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 TNFRSF1BP20333 461 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 TIMP3P35625 211 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 OR1E2P47887 323 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 HSPB2Q16082 182 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 FXNQ16595 210 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 ENTPD8Q5MY95 495 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 OR2A2Q6IF42 318 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 C6orf89Q6UWU4 347 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 CCDC121Q6ZUS5 278 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 NCCRP1Q6ZVX7 275 aaPredicted RBP12.43□□□□□ -0.42
TUBB3-202ENST00000553656 VTCN1Q7Z7D3 282 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 MRGPRGQ86SM5 289 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 ATG4DQ86TL0 474 aaPredicted RBP12.43□□□□□ -0.42
TUBB3-202ENST00000553656 MARVELD2Q8N4S9 558 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 MBD3L2Q8NHZ7 208 aaPredicted RBP12.43□□□□□ -0.42
TUBB3-202ENST00000553656 FNDC9Q8TBE3 224 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 ASB5Q8WWX0 329 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 MCUR1Q96AQ8 359 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 SDCCAG3Q96C92 435 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 CCDC124Q96CT7 223 aaKnown RBP12.43□□□□□ -0.42
TUBB3-202ENST00000553656 HSH2DQ96JZ2 352 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 ZFP3Q96NJ6 502 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 UCN2Q96RP3 112 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 WFDC6Q9BQY6 131 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 OR11A1Q9GZK7 315 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 POLR2J2Q9GZM3 115 aaKnown RBP12.43□□□□□ -0.42
TUBB3-202ENST00000553656 PCDHAC1Q9H158 963 aa12.43□□□□□ -0.42
TUBB3-202ENST00000553656 POLR2J3Q9H1A7 115 aaKnown RBP12.43□□□□□ -0.42
TUBB3-202ENST00000553656 A0A0B4J2E0 115 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 A0A1B0GX12 115 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 TRAPPC13A5PLN9 417 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 DNAJC8O75937 253 aaPredicted RBP12.42□□□□□ -0.42
TUBB3-202ENST00000553656 AHSA1O95433 338 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms