RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ADAM28Q9UKQ2 775 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 TP53TG3Q9ULZ0 132 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 CHD4Q14839 1912 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 A0A0G2JRQ6 117 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 E7ENQ6 273 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 PFKFB2O60825 505 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 RAMP3O60896 148 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 DIRAS1O95057 198 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 NPR2P20594 1047 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 PSMB1P20618 241 aaKnown RBP3.69□□□□□ -1.82
SYNE2-210ENST00000553455 COX5AP20674 150 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 TAGLN2P37802 199 aaKnown RBP3.69□□□□□ -1.82
SYNE2-210ENST00000553455 QARSP47897 775 aaKnown RBP3.69□□□□□ -1.82
SYNE2-210ENST00000553455 BIDP55957 195 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 RPS8P62241 208 aaKnown RBP3.69□□□□□ -1.82
SYNE2-210ENST00000553455 SLC15A2Q16348 729 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 CFAP221Q4G0U5 840 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 WDR74Q6RFH5 385 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-210ENST00000553455 EFL1Q7Z2Z2 1120 aaKnown RBP3.69□□□□□ -1.82
SYNE2-210ENST00000553455 NRMQ8IXM6 262 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 BHLHE23Q8NDY6 225 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 RAPGEF5Q92565 580 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 NEIL2Q969S2 332 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 EFHD2Q96C19 240 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-210ENST00000553455 PLEKHF1Q96S99 279 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 NPY6RQ99463 290 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 MAPKAP1Q9BPZ7 522 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 CNPY3Q9BT09 278 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 NMUR2Q9GZQ4 415 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 YY1AP1Q9H869 796 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 COX16Q9P0S2 106 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 PRPF19Q9UMS4 504 aaKnown RBP3.69□□□□□ -1.82
SYNE2-210ENST00000553455 KIF25-AS1Q9Y6Z4 181 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 RAI1Q7Z5J4 1906 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-210ENST00000553455 CLSPNQ9HAW4 1339 aa3.69□□□□□ -1.82
SYNE2-210ENST00000553455 IDSB3KWA1 339 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 RGS16O15492 202 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-210ENST00000553455 AP2A1O95782 977 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 TIMP1P01033 207 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 HSMCR30P0CW71 290 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 RBMY1CP0DJD4 496 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 HMGB2P26583 209 aaKnown RBP3.68□□□□□ -1.82
SYNE2-210ENST00000553455 NTSP30990 170 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 UGT1A5P35504 534 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 RPL13AP40429 203 aaKnown RBP3.68□□□□□ -1.82
SYNE2-210ENST00000553455 MAGEA8P43361 318 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 DUSP3P51452 185 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-210ENST00000553455 CCDC173Q0VFZ6 552 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 DPYSL2Q16555 572 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 KLF17Q5JT82 389 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-210ENST00000553455 OR2G6Q5TZ20 316 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 UNQ9370/PRO34162Q6UXP9 181 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 ACOT7LQ6ZUV0 252 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 DHDDSQ86SQ9 333 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 ZNF584Q8IVC4 421 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 CCDC50Q8IVM0 306 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 SPAG16Q8N0X2 631 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 SCFD1Q8WVM8 642 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 CHCHD10Q8WYQ3 142 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-210ENST00000553455 PGLYRP4Q96LB8 373 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 GAL3ST1Q99999 423 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 PTGES2Q9H7Z7 377 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 FN3KRPQ9HA64 309 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 DCDC2Q9UHG0 476 aa3.68□□□□□ -1.82
SYNE2-210ENST00000553455 FRMPD3Q5JV73 1810 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 ATP10AO60312 1499 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 IGKV1D-8A0A087WSZ0 117 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 A0A1B0GVY2 172 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 SNTNA6NMZ2 147 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 HCRTR1O43613 425 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 FCMRO60667 390 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 B4GALT2O60909 372 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 ATP5LO75964 103 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 ZNF853P0CG23 659 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 ZBTB25P24278 435 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 HTR1FP30939 366 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 BTDP43251 543 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 CEBPDP49716 269 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-210ENST00000553455 SLC26A2P50443 739 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 PLK1P53350 603 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 CRYBB1P53674 252 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-210ENST00000553455 ATP1B3P54709 279 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 ZNF45Q02386 682 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 NCBP1Q09161 790 aaKnown RBP3.67□□□□□ -1.82
SYNE2-210ENST00000553455 VGLL4Q14135 290 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 ARCQ7LC44 396 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 FAM220AQ7Z4H9 259 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 C14orf178Q8N769 122 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-210ENST00000553455 BBS1Q8NFJ9 593 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 OR13C2Q8NGS9 318 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 HTR3CQ8WXA8 447 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 NT5C3BQ969T7 300 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 RBM14Q96PK6 669 aaKnown RBP3.67□□□□□ -1.82
SYNE2-210ENST00000553455 SMIM14Q96QK8 99 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 YTHDF1Q9BYJ9 559 aaKnown RBP3.67□□□□□ -1.82
SYNE2-210ENST00000553455 RAB34Q9BZG1 259 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 MCCC2Q9HCC0 563 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 B4GALT7Q9UBV7 327 aa3.67□□□□□ -1.82
SYNE2-210ENST00000553455 PIGLQ9Y2B2 252 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms