RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 RAB30Q15771 203 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 THSD4Q6ZMP0 1018 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 BTN2A1Q7KYR7 527 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 SSX6Q7RTT6 188 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 KCTD12Q96CX2 325 aaKnown RBP11.43□□□□□ -0.58
HDAC7-230ENST00000552960 LRIG1Q96JA1 1093 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 CXorf58Q96LI9 332 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 OR14A2Q96R54 314 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 PPA2Q9H2U2 334 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 SDHAF2Q9NX18 166 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 SIDT1Q9NXL6 827 aaKnown RBP11.43□□□□□ -0.58
HDAC7-230ENST00000552960 C4orf51C9J302 202 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 CACNB4O00305 520 aaPredicted RBP11.43□□□□□ -0.58
HDAC7-230ENST00000552960 PEX14O75381 377 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 DRD2P14416 443 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 MAKP20794 623 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 COL9A1P20849 921 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 NUP62P37198 522 aaPredicted RBP11.43□□□□□ -0.58
HDAC7-230ENST00000552960 PSMB10P40306 273 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 ARHGDIBP52566 201 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 PITPNAQ00169 270 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 CRMP1Q14194 572 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 ITPRIPL2Q3MIP1 535 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 TMEM255AQ5JRV8 349 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 AGBL4Q5VU57 503 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 TMEM184AQ6ZMB5 413 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 C3P1Q6ZMU1 363 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 OR56A1Q8NGH5 318 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 OR51Q1Q8NH59 317 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 SMPDL3BQ92485 455 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 PTP4A1Q93096 173 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 ZNF780BQ9Y6R6 833 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 A0A0G2JK05 382 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 SLC31A1O15431 190 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 ARPC5O15511 151 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 EMC8O43402 210 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 ZIC2O95409 532 aaPredicted RBP11.43□□□□□ -0.58
HDAC7-230ENST00000552960 SIX6O95475 246 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 EGFP01133 1207 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 ANXA7P20073 488 aaKnown RBP11.43□□□□□ -0.58
HDAC7-230ENST00000552960 RAD52P43351 418 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 ACSM1Q08AH1 577 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 DECR1Q16698 335 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 PUS10Q3MIT2 529 aaKnown RBP11.43□□□□□ -0.58
HDAC7-230ENST00000552960 APOOLQ6UXV4 268 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 GJD3Q8N144 294 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 HDDC3Q8N4P3 179 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 LINC01555Q8NAE3 123 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 OR4C6Q8NH72 309 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 LHFPL5Q8TAF8 219 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 SLC35A4Q96G79 324 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 TIMP4Q99727 224 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 AICDAQ9GZX7 198 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 LMAN2LQ9H0V9 348 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 POLMQ9NP87 494 aaPredicted RBP11.43□□□□□ -0.58
HDAC7-230ENST00000552960 COPZ2Q9P299 210 aa11.43□□□□□ -0.58
HDAC7-230ENST00000552960 SNRNP200O75643 2136 aaKnown RBP11.42□□□□□ -0.58
HDAC7-230ENST00000552960 A0A0A6YYD5 115 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 TCRBV16S1A1N1A0A5B0 115 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 TPPPO94811 219 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 ASGR2P07307 311 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 HIST1H1TP22492 207 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-230ENST00000552960 KIR2DL1P43626 348 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-230ENST00000552960 PSMA6P60900 246 aaKnown RBP11.42□□□□□ -0.58
HDAC7-230ENST00000552960 SIM1P81133 766 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-230ENST00000552960 REEP5Q00765 189 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 CST6Q15828 149 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 TOE1Q96GM8 510 aaKnown RBP11.42□□□□□ -0.58
HDAC7-230ENST00000552960 ZNF514Q96K75 400 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-230ENST00000552960 CDCA3Q99618 268 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-230ENST00000552960 C1QTNF2Q9BXJ5 285 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 TTYH1Q9H313 450 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-230ENST00000552960 KCMF1Q9P0J7 381 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 ZMIZ1Q9ULJ6 1067 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 KCNK6Q9Y257 313 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 CA5BQ9Y2D0 317 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 URB1O60287 2271 aaKnown RBP11.42□□□□□ -0.58
HDAC7-230ENST00000552960 ANKRD61A6NGH8 418 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 OR52A4PA6NMU1 304 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 FMO6PO60774 539 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 KDM4BO94953 1096 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 PPP1R3DO95685 299 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 BCL6P41182 706 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 FOXK2Q01167 660 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 TMEM196Q5HYL7 178 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 SLITRK4Q8IW52 837 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 OR52I2Q8NH67 350 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 OR5K2Q8NHB8 316 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 CXorf40AQ8TE69 158 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 MARVELD3Q96A59 401 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 ELP4Q96EB1 424 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 PEX11GQ96HA9 241 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 HS6ST2Q96MM7 605 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 ARHGDIGQ99819 225 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 GINS4Q9BRT9 223 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 SAV1Q9H4B6 383 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-230ENST00000552960 EPHX3Q9H6B9 360 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 PELI2Q9HAT8 420 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 ADAP2Q9NPF8 381 aa11.42□□□□□ -0.58
HDAC7-230ENST00000552960 CA10Q9NS85 328 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms