RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	JPH3	Q8WXH2	748 aa	Predicted RBP	10.88	□□□□□ -0.67
LETMD1-223	ENST00000550442	DNASE2B	Q8WZ79	361 aa		10.88	□□□□□ -0.67
LETMD1-223	ENST00000550442	C1GALT1C1	Q96EU7	318 aa		10.88	□□□□□ -0.67
LETMD1-223	ENST00000550442	AHCYL2	Q96HN2	611 aa	Known RBP	10.88	□□□□□ -0.67
LETMD1-223	ENST00000550442	CDC6	Q99741	560 aa		10.88	□□□□□ -0.67
LETMD1-223	ENST00000550442	NDC1	Q9BTX1	674 aa		10.88	□□□□□ -0.67
LETMD1-223	ENST00000550442	PLA2G12A	Q9BZM1	189 aa		10.88	□□□□□ -0.67
LETMD1-223	ENST00000550442	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
LETMD1-223	ENST00000550442	QRSL1	Q9H0R6	528 aa	Known RBP	10.88	□□□□□ -0.67
LETMD1-223	ENST00000550442	SMURF1	Q9HCE7	757 aa		10.88	□□□□□ -0.67
LETMD1-223	ENST00000550442	ERVK13-1	Q9NX77	482 aa		10.88	□□□□□ -0.67
LETMD1-223	ENST00000550442	CNIH4	Q9P003	139 aa		10.88	□□□□□ -0.67
LETMD1-223	ENST00000550442	CLEC2D	Q9UHP7	191 aa		10.88	□□□□□ -0.67
LETMD1-223	ENST00000550442	CBLC	Q9ULV8	474 aa		10.88	□□□□□ -0.67
LETMD1-223	ENST00000550442	SF3B6	Q9Y3B4	125 aa	Known RBP	10.88	□□□□□ -0.67
LETMD1-223	ENST00000550442	CMAHP	Q9Y471	501 aa		10.88	□□□□□ -0.67
LETMD1-223	ENST00000550442	DOCK9	Q9BZ29	2069 aa		10.88	□□□□□ -0.67
LETMD1-223	ENST00000550442		A0A087WUJ7	227 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	GXYLT2	A0PJZ3	443 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	SERINC4	A6NH21	518 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	HSPB2	A8KAH6	182 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	RHPN2P1	A8MT19	583 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442		B4DGG1	531 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442		B8ZZF3	427 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	FOXS1	O43638	330 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	RDH16	O75452	317 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	IL33	O95760	270 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	STATH	P02808	62 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	SAG	P10523	405 aa	Predicted RBP	10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	RPS19	P39019	145 aa	Known RBP	10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	RANBP1	P43487	201 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	GABRA4	P48169	554 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	MTNR1B	P49286	362 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	NXPH1	P58417	271 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	RIPPLY1	Q0D2K3	151 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	GGTLC2	Q14390	218 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	HSPB2	Q16082	182 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	MAPK14	Q16539	360 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	CCDC58	Q4VC31	144 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	ALG10B	Q5I7T1	473 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	LIPK	Q5VXJ0	399 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	WBP2NL	Q6ICG8	309 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	SLC30A6	Q6NXT4	461 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	NIPAL3	Q6P499	406 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	WDR74	Q6RFH5	385 aa	Predicted RBP	10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	ZNF322	Q6U7Q0	402 aa	Predicted RBP	10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	SYS1	Q8N2H4	156 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	IQCF1	Q8N6M8	205 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	OR8D4	Q8NGM9	314 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	OR9A4	Q8NGU2	314 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	OR4Q3	Q8NH05	313 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	THRSP	Q92748	146 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	DAZL	Q92904	295 aa	Known RBP	10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	EFHD2	Q96C19	240 aa	Predicted RBP	10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	SAMD8	Q96LT4	415 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	CMTM3	Q96MX0	182 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	GPX7	Q96SL4	187 aa	Predicted RBP	10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	SECISBP2	Q96T21	854 aa	Known RBP	10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	MRI1	Q9BV20	369 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	OR10A5	Q9H207	317 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	DNAJB12	Q9NXW2	375 aa	Known RBP	10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	MOK	Q9UQ07	419 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	ZNF337	Q9Y3M9	751 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	OR10H1	Q9Y4A9	318 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	NIN	Q8N4C6	2090 aa		10.87	□□□□□ -0.67
LETMD1-223	ENST00000550442	DOPEY2	Q9Y3R5	2298 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442		A0A1B0GWA3	101 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442		A0A1W2PQD3	144 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	PLPP2	O43688	288 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	DUX1	O43812	170 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	EIF4E2	O60573	245 aa	Known RBP	10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	THY1	P04216	161 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	IGFBP1	P08833	259 aa	Predicted RBP	10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	OR2T7	P0C7T2	308 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	TRAPPC2	P0DI81	140 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	TRAPPC2B	P0DI82	140 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	PVR	P15151	417 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	HPGD	P15428	266 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	GLB1	P16278	677 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	TYRP1	P17643	537 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	TBXA2R	P21731	343 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	FUT4	P22083	530 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	HTR2A	P28223	471 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	TNFSF8	P32971	234 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	ACAA2	P42765	397 aa	Known RBP	10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	ARL4D	P49703	201 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	AFF3	P51826	1226 aa	Known RBP	10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	MAP2K6	P52564	334 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	ELAVL1	Q15717	326 aa	Known RBP	10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	CRTC2	Q53ET0	693 aa	Predicted RBP	10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	KLHL26	Q53HC5	615 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	TRIL	Q7L0X0	811 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	PRSS42	Q7Z5A4	293 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	CPO	Q8IVL8	374 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	MISP	Q8IVT2	679 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	GPR135	Q8IZ08	494 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	ZNF615	Q8N8J6	731 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	FAM71C	Q8NEG0	241 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	OR2T27	Q8NH04	317 aa		10.86	□□□□□ -0.67
LETMD1-223	ENST00000550442	OR51Q1	Q8NH59	317 aa		10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms