RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 DACH2Q96NX9 599 aa8.7□□□□□ -1.02
HDAC7-229ENST00000549883 HS3ST6Q96QI5 342 aa8.7□□□□□ -1.02
HDAC7-229ENST00000549883 PSD2Q9BQI7 771 aa8.7□□□□□ -1.02
HDAC7-229ENST00000549883 CPPED1Q9BRF8 314 aaPredicted RBP8.7□□□□□ -1.02
HDAC7-229ENST00000549883 PAQR5Q9NXK6 330 aaPredicted RBP8.7□□□□□ -1.02
HDAC7-229ENST00000549883 KLHL13Q9P2N7 655 aa8.7□□□□□ -1.02
HDAC7-229ENST00000549883 CHRNA9Q9UGM1 479 aa8.7□□□□□ -1.02
HDAC7-229ENST00000549883 PRSS50Q9UI38 385 aa8.7□□□□□ -1.02
HDAC7-229ENST00000549883 PLEKHA6Q9Y2H5 1048 aa8.7□□□□□ -1.02
HDAC7-229ENST00000549883 TMED7Q9Y3B3 224 aa8.7□□□□□ -1.02
HDAC7-229ENST00000549883 EMC9Q9Y3B6 208 aa8.7□□□□□ -1.02
HDAC7-229ENST00000549883 F8P00451 2351 aa8.7□□□□□ -1.02
HDAC7-229ENST00000549883 RAI1Q7Z5J4 1906 aaPredicted RBP8.7□□□□□ -1.02
HDAC7-229ENST00000549883 UQCRHLA0A096LP55 91 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 A0A0G2JPF8 293 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 HNRNPCL2B2RXH8 293 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 HNRNPCL3B7ZW38 293 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 C16orf97H3BN30 126 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 SULT2B1O00204 365 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 CYTIPO60759 359 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 HNRNPCL1O60812 293 aaKnown RBP8.69□□□□□ -1.02
HDAC7-229ENST00000549883 GCM2O75603 506 aaPredicted RBP8.69□□□□□ -1.02
HDAC7-229ENST00000549883 PRKD3O94806 890 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 PGM3O95394 542 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 PABPC4LP0CB38 370 aaKnown RBP8.69□□□□□ -1.02
HDAC7-229ENST00000549883 HNRNPCL4P0DMR1 293 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 ARAFP10398 606 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 GPX2P18283 190 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 AQP1P29972 269 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 PEX19P40855 299 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 APOBEC1P41238 236 aaKnown RBP8.69□□□□□ -1.02
HDAC7-229ENST00000549883 MAGEA8P43361 318 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 MTPNP58546 118 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 RUNDC3AQ59EK9 446 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 GCNT6Q5T4J0 391 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 CXorf67Q86X51 503 aaPredicted RBP8.69□□□□□ -1.02
HDAC7-229ENST00000549883 CADM2Q8N3J6 435 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 STON2Q8WXE9 905 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 REXO5Q96IC2 774 aaKnown RBP8.69□□□□□ -1.02
HDAC7-229ENST00000549883 SLC39A3Q9BRY0 314 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 SPATA9Q9BWV2 254 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 ADAM19Q9H013 955 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 PLEKHF2Q9H8W4 249 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 SLC24A3Q9HC58 644 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 BCL2L10Q9HD36 194 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 TIGARQ9NQ88 270 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 SERINC1Q9NRX5 453 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 CCM2LQ9NUG4 571 aaPredicted RBP8.69□□□□□ -1.02
HDAC7-229ENST00000549883 ELOVL5Q9NYP7 299 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.69□□□□□ -1.02
HDAC7-229ENST00000549883 CADP27708 2225 aa8.69□□□□□ -1.02
HDAC7-229ENST00000549883 DSCAMO60469 2012 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 ENO4A6NNW6 628 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 ZNF716A6NP11 495 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 FAAHO00519 579 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 IGHV3-9P01782 118 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 YES1P07947 543 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 THBS1P07996 1170 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 FPR1P21462 350 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 HTR2AP28223 471 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 SLC1A3P43003 542 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 POLR2HP52434 150 aaKnown RBP8.68□□□□□ -1.02
HDAC7-229ENST00000549883 FOXG1P55316 489 aaPredicted RBP8.68□□□□□ -1.02
HDAC7-229ENST00000549883 OR2B6P58173 313 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 CDK6Q00534 326 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 RASGEF1BQ0VAM2 473 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 FADDQ13158 208 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 RNPS1Q15287 305 aaKnown RBP8.68□□□□□ -1.02
HDAC7-229ENST00000549883 LIN52Q52LA3 116 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 ZNF311Q5JNZ3 666 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 TMEM201Q5SNT2 666 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 RNF220Q5VTB9 566 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 FBXW10Q5XX13 1052 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 DHDDSQ86SQ9 333 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 ATG4DQ86TL0 474 aaPredicted RBP8.68□□□□□ -1.02
HDAC7-229ENST00000549883 MTDHQ86UE4 582 aaKnown RBP8.68□□□□□ -1.02
HDAC7-229ENST00000549883 PTOV1Q86YD1 416 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 GABRG1Q8N1C3 465 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 CGREF1Q99674 301 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 MED18Q9BUE0 208 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 BCO1Q9HAY6 547 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 GLRX2Q9NS18 164 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 TMEM45AQ9NWC5 275 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 CALML5Q9NZT1 146 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 NDRG3Q9UGV2 375 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 ST6GALNAC2Q9UJ37 374 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 USP22Q9UPT9 525 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 NDUFAF1Q9Y375 327 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 GMEB1Q9Y692 573 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 TEP1Q99973 2627 aaKnown RBP8.68□□□□□ -1.02
HDAC7-229ENST00000549883 ALPK2Q86TB3 2170 aa8.68□□□□□ -1.02
HDAC7-229ENST00000549883 C5orf58C9J3I9 102 aa8.67□□□□□ -1.02
HDAC7-229ENST00000549883 CASKO14936 926 aa8.67□□□□□ -1.02
HDAC7-229ENST00000549883 KLF4O43474 513 aa8.67□□□□□ -1.02
HDAC7-229ENST00000549883 TPST2O60704 377 aa8.67□□□□□ -1.02
HDAC7-229ENST00000549883 PMS2P2O95744 297 aa8.67□□□□□ -1.02
HDAC7-229ENST00000549883 PLAUP00749 431 aa8.67□□□□□ -1.02
HDAC7-229ENST00000549883 ADAP00813 363 aa8.67□□□□□ -1.02
HDAC7-229ENST00000549883 VIMP08670 466 aaKnown RBP8.67□□□□□ -1.02
HDAC7-229ENST00000549883 ADSLP30566 484 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms