RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 STK11Q15831 433 aa17.32■□□□□ 0.36
SLC48A1-207ENST00000549243 AP1ARQ63HQ0 302 aa17.32■□□□□ 0.36
SLC48A1-207ENST00000549243 CLEC9AQ6UXN8 241 aa17.32■□□□□ 0.36
SLC48A1-207ENST00000549243 GALNT5Q7Z7M9 940 aa17.32■□□□□ 0.36
SLC48A1-207ENST00000549243 MTDHQ86UE4 582 aaKnown RBP17.32■□□□□ 0.36
SLC48A1-207ENST00000549243 ADGRG3Q86Y34 549 aa17.32■□□□□ 0.36
SLC48A1-207ENST00000549243 WDR60Q8WVS4 1066 aa17.32■□□□□ 0.36
SLC48A1-207ENST00000549243 HSD17B8Q92506 261 aa17.32■□□□□ 0.36
SLC48A1-207ENST00000549243 EXOSC3Q9NQT5 275 aaKnown RBP17.32■□□□□ 0.36
SLC48A1-207ENST00000549243 TRIM64A6NGJ6 449 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 TRIM64BA6NI03 449 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 AGAP5A6NIR3 686 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 ZNF724A8MTY0 619 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 SLCO1B7G3V0H7 640 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 SMAD7O15105 426 aaKnown RBP17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 SLC22A3O75751 556 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 IGHV3-9P01782 118 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 IDO1P14902 403 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 LTBQ06643 244 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 LRRC74AQ0VAA2 488 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 PDCD4Q53EL6 469 aaKnown RBP17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 ABLIM2Q6H8Q1 611 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 LRRC74BQ6ZQY2 392 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 MAVSQ7Z434 540 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 ZNF611Q8N823 705 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 GLB1L3Q8NCI6 653 aaPredicted RBP17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 TLCD1Q96CP7 247 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 ZHX1-C8orf76Q96EF9 292 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 POTEKPQ9BYX7 375 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 GSX2Q9BZM3 304 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 TMBIM4Q9HC24 238 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 NGBQ9NPG2 151 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 LAMP3Q9UQV4 416 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 RNF115Q9Y4L5 304 aa17.31■□□□□ 0.36
SLC48A1-207ENST00000549243 TMED7-TICAM2A0A0A6YYA0 188 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 ERLIN1O75477 346 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 ANP32DO95626 131 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 IL6P05231 212 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 CD3EP07766 207 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 IL7RP16871 459 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 OR2B6P58173 313 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 NCMAPQ5T1S8 102 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 PRSS57Q6UWY2 283 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 CCDC103Q8IW40 242 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 CMIPQ8IY22 773 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 UBE2J2Q8N2K1 259 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 LILRB1Q8NHL6 650 aaPredicted RBP17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 IGFBPL1Q8WX77 278 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 NEUROG1Q92886 237 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 MAELQ96JY0 434 aaKnown RBP17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 OR52B2Q96RD2 323 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 ESRP2Q9H6T0 727 aaKnown RBP17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 MTHFD2LQ9H903 347 aaPredicted RBP17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 EMC3Q9P0I2 261 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 TMED7Q9Y3B3 224 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 HDGFL3Q9Y3E1 203 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 CSPG4Q6UVK1 2322 aa17.3■□□□□ 0.36
SLC48A1-207ENST00000549243 ZANQ9Y493 2812 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 ZNF716A6NP11 495 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 RAMP1O60894 148 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 KRT75O95678 551 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 PMS2P2O95744 297 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 ETFAP13804 333 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 RPS4Y1P22090 263 aaKnown RBP17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 IGHV1-2P23083 117 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 CRATP43155 626 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 SLC18A1P54219 525 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 TXNL4AP83876 142 aaKnown RBP17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 BSPH1Q075Z2 132 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 GNA13Q14344 377 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 GTDC1Q4AE62 458 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 MRPL2Q5T653 305 aaKnown RBP17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 SEZ6L2Q6UXD5 910 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 OR9I1Q8NGQ6 314 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 COX4I2Q96KJ9 171 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 CXorf56Q9H5V9 222 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 RLIMQ9NVW2 624 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 OSGIN1Q9UJX0 560 aa17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 NOSIPQ9Y314 301 aaKnown RBP17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 HEATR1Q9H583 2144 aaKnown RBP17.29■□□□□ 0.36
SLC48A1-207ENST00000549243 IGKV3D-15A0A087WSY6 115 aa17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 TMEM72A0PK05 275 aa17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 UBDO15205 165 aa17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 DBIP07108 87 aaKnown RBP17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 TACR3P29371 465 aa17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 HTR3AP46098 478 aa17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 POLR2HP52434 150 aaKnown RBP17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 MVDP53602 400 aa17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 PPA1Q15181 289 aa17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 MAPK11Q15759 364 aa17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 BEND6Q5SZJ8 279 aaPredicted RBP17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 ADAM5Q6NVV9 412 aa17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 VRK2Q86Y07 508 aa17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 PEX5LQ8IYB4 626 aa17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 KBTBD8Q8NFY9 601 aa17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 PIGXQ8TBF5 258 aa17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 PIWIL2Q8TC59 973 aaKnown RBP17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 FBXW5Q969U6 566 aa17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 VPS33AQ96AX1 596 aa17.28■□□□□ 0.36
SLC48A1-207ENST00000549243 APH1AQ96BI3 265 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms