RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 TRBV5-7A0A0A0MS05 114 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 LRRC3CA6NJW4 275 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 CLDN4O14493 209 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 ANGPT2O15123 496 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FGF17O60258 216 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 OR7A10O76100 309 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 MT-CO3P00414 261 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FABP3P05413 133 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 ACP5P13686 325 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF708P17019 499 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FBLP22087 321 aaKnown RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 ITGA3P26006 1051 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TIMP3P35625 211 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 RRADP55042 308 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 MRPS35P82673 323 aaKnown RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 MRPS11P82912 194 aaKnown RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 RCN1Q15293 331 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TMEM30BQ3MIR4 351 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 HSD17B12Q53GQ0 312 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 CCNYL2Q5T2Q4 361 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 KLHL17Q6TDP4 642 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 BTN2A1Q7KYR7 527 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF367Q7RTV3 350 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TMEM123Q8N131 208 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 OR13F1Q8NGS4 319 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 OR51Q1Q8NH59 317 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 UBASH3BQ8TF42 649 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 SNX19Q92543 992 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 OR52E6Q96RD3 313 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF184Q99676 751 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 SLC35A5Q9BS91 424 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 CYP4F12Q9HCS2 524 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TEX10Q9NXF1 929 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 PRSS50Q9UI38 385 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 SYNJ2BP-COX16A0A087WUM0 186 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 A6NIZ1 184 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 AQP7P3A6NL99 342 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 GABARAPO95166 117 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 CGAP01215 116 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 IGLV1-44P01699 117 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 APEX1P27695 318 aaKnown RBP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 EPHA3P29320 983 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 HTR1FP30939 366 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 WASP42768 502 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 SLC1A3P43003 542 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 POLR2HP52434 150 aaKnown RBP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 RAP1BP61224 184 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 RAP1AP62834 184 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 C17orf67Q0P5P2 114 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 SELENBP1Q13228 472 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 SPIDRQ14159 915 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 SELPLGQ14242 412 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF181Q2M3W8 571 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 C18orf21Q32NC0 220 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 HP1BP3Q5SSJ5 553 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 SLC25A47Q6Q0C1 308 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 OPN5Q6U736 354 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 DHRS13Q6UX07 377 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 THAP5Q7Z6K1 395 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 P2RY8Q86VZ1 359 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 LACC1Q8IV20 430 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 C10orf111Q8N326 155 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 SLC5A8Q8N695 610 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 FNDC5Q8NAU1 212 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 OR6X1Q8NH79 312 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 SLC22A8Q8TCC7 542 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 RNF125Q96EQ8 232 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 Q96M66 194 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 KCNA7Q96RP8 456 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 ITPAQ9BY32 194 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 OR10A5Q9H207 317 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 C1orf198Q9H425 327 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 TOR3AQ9H497 397 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 SEMA4GQ9NTN9 838 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 COX16Q9P0S2 106 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 RARRES3Q9UL19 164 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 CA14Q9ULX7 337 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 HS3ST3B1Q9Y662 390 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 TECTAO75443 2155 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 GJE1A6NN92 205 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 H0Y3Z8 333 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 RFXANKO14593 260 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 SURF4O15260 269 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 MT-ND5P03915 603 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 LIFP15018 202 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 IGFBP3P17936 291 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 MATN1P21941 496 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 SLCO1A2P46721 670 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 CDK9P50750 372 aaKnown RBP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 CHN2P52757 468 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 OR4D2P58180 307 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 POU6F2P78424 691 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 HMGCS1Q01581 520 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 SRSF4Q08170 494 aaKnown RBP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 SF3A3Q12874 501 aaKnown RBP eCLIP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 CDK10Q15131 360 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF311Q5JNZ3 666 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF773Q6PK81 442 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 LDB1Q86U70 411 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms