RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 CPMP14384 443 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 HTRA4P83105 476 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 C2orf27AQ580R0 203 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 GPR139Q6DWJ6 353 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 FBXO42Q6P3S6 717 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 VITQ6UXI7 678 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 BTN2A1Q7KYR7 527 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 COMMD7Q86VX2 200 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 CMTM4Q8IZR5 234 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 MS4A15Q8N5U1 240 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 CNOT9Q92600 299 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 TBC1D29Q9UFV1 150 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 KCNN3Q9UGI6 736 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 RCE1Q9Y256 329 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 MRPS2Q9Y399 296 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 RPS10-NUDT3A0A1W2PQS6 291 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 G3V3Q6 166 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 CTSVO60911 334 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 HNRNPA1P09651 372 aaKnown RBP eCLIP13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 PTHLHP12272 177 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 NT5EP21589 574 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 RPS4Y1P22090 263 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 AK4P27144 223 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 RPS11P62280 158 aaKnown RBP eCLIP13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 PITPNAQ00169 270 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 COL28A1Q2UY09 1125 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 HES5Q5TA89 166 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 HACD4Q5VWC8 232 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 Q6ZTK2 550 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 LINGO2Q7L985 606 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 TMEM52Q8NDY8 209 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 ZNRF4Q8WWF5 429 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 SMARCD2Q92925 531 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 HGDQ93099 445 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 NXPE2Q96DL1 559 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 MSANTD3Q96H12 275 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 ERMAPQ96PL5 475 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 RBP7Q96R05 134 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 SLC25A18Q9H1K4 315 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 SLC6A17Q9H1V8 727 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 FLRT3Q9NZU0 649 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 THAP10Q9P2Z0 257 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 GNG8Q9UK08 70 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 PPIEQ9UNP9 301 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 A0A087WV48 116 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 VEGFCP49767 419 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 CLDN12P56749 244 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 SGCGQ13326 291 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 NLRC3Q7RTR2 1065 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 RD3Q7Z3Z2 195 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 ZNF559Q9BR84 538 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 OR10A4Q9H209 315 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 CLEC4MQ9H2X3 399 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 MCCC2Q9HCC0 563 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 FGF22Q9HCT0 170 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 AUP1Q9Y679 476 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 TRAV1-2A0A0B4J238 106 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 TRBV2A0A0J9YWF9 115 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 IDSB3KWA1 339 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 GPR89AB7ZAQ6 455 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 SLC35G6P0C7Q6 338 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 GPR89BP0CG08 455 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 PEPDP12955 493 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 HIST1H1CP16403 213 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 GABRA3P34903 492 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 HSF2Q03933 536 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 PUDPQ08623 228 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 FHL1Q13642 323 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 CDK5R1Q15078 307 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 GXYLT1Q4G148 440 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 FHL5Q5TD97 284 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 FAAP20Q6NZ36 180 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 IDO2Q6ZQW0 420 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 FAM98AQ8NCA5 519 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 OR11G2Q8NGC1 345 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 OR5T3Q8NGG3 340 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 SMIM19Q96E16 107 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 RBCK1Q9BYM8 510 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 ZNF436Q9C0F3 470 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 COPZ2Q9P299 210 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 DPP7Q9UHL4 492 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 DAPP1Q9UN19 280 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 C19orf53Q9UNZ5 99 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 CAMK2AQ9UQM7 478 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 SLC17A4Q9Y2C5 497 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 STON1Q9Y6Q2 735 aa13.03□□□□□ -0.32
RAPGEF3-218ENST00000548919 PRR19A6NJB7 356 aa13.02□□□□□ -0.32
RAPGEF3-218ENST00000548919 FGF17O60258 216 aa13.02□□□□□ -0.32
RAPGEF3-218ENST00000548919 CT62P0C5K7 136 aa13.02□□□□□ -0.32
RAPGEF3-218ENST00000548919 GRPRP30550 384 aa13.02□□□□□ -0.32
RAPGEF3-218ENST00000548919 IGFALSP35858 605 aa13.02□□□□□ -0.32
RAPGEF3-218ENST00000548919 ZNF267Q14586 743 aaPredicted RBP13.02□□□□□ -0.32
RAPGEF3-218ENST00000548919 STPG1Q5TH74 334 aa13.02□□□□□ -0.32
RAPGEF3-218ENST00000548919 RPL13AP3Q6NVV1 102 aa13.02□□□□□ -0.32
RAPGEF3-218ENST00000548919 UBE2Q1Q7Z7E8 422 aa13.02□□□□□ -0.32
RAPGEF3-218ENST00000548919 FTMTQ8N4E7 242 aa13.02□□□□□ -0.32
RAPGEF3-218ENST00000548919 TEX19Q8NA77 164 aa13.02□□□□□ -0.32
RAPGEF3-218ENST00000548919 OR56B4Q8NH76 319 aa13.02□□□□□ -0.32
RAPGEF3-218ENST00000548919 SMIM4Q8WVI0 70 aa13.02□□□□□ -0.32
RAPGEF3-218ENST00000548919 ASB16Q96NS5 453 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms