RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 PRSS27Q9BQR3 290 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 THAP7Q9BT49 309 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 PITHD1Q9GZP4 211 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 SPRTNQ9H040 489 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 FGF20Q9NP95 211 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 NCOR1O75376 2440 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 CACNA1EQ15878 2313 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 KIF26AQ9ULI4 1882 aaPredicted RBP12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 A0A1B0GTH9 108 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 TRDV1A0A1B0GX56 115 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 MCIDASD6RGH6 385 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 EVI2BP34910 448 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 ENPP2Q13822 863 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 ARHGAP11BQ3KRB8 267 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 KANSL1Q7Z3B3 1105 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 OR2L13Q8N349 312 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 ZNF655Q8N720 491 aaPredicted RBP12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 ZNF563Q8TA94 476 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 GRPEL2Q8TAA5 225 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 ACOXLQ9NUZ1 547 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 ASB6Q9NWX5 421 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 MYEF2Q9P2K5 600 aaKnown RBP12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 ADAM30Q9UKF2 790 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 KNTC1P50748 2209 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 TNFP01375 233 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 NGFRP08138 427 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 EVX1P49640 407 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 KIR2DS3Q14952 304 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 RTL4Q6ZR62 310 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 ABHD4Q8TB40 342 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 ZPLD1Q8TCW7 415 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 RMI1Q9H9A7 625 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 FLRT3Q9NZU0 649 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 CD207Q9UJ71 328 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 C19orf53Q9UNZ5 99 aaPredicted RBP12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 AHCTF1Q8WYP5 2266 aa12.61□□□□□ -0.39
PRPF40B-209ENST00000548825 GPR89AB7ZAQ6 455 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 FAM47E-STBD1D6RA91 191 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 GPR89BP0CG08 455 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 GIFP27352 417 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 SFXN4Q6P4A7 337 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 KIRREL2Q6UWL6 708 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 RDH10Q8IZV5 341 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 RCBTB1Q8NDN9 531 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 DERL3Q96Q80 235 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 C2orf42Q9NWW7 574 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 SSNA1O43805 119 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 SBK2P0C263 348 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 HK1P19367 917 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 NTRK2Q16620 822 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 POGLUT1Q8NBL1 392 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 DNAAF1Q8NEP3 725 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 OR8H1Q8NGG4 311 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 RFT1Q96AA3 541 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 MOV10Q9HCE1 1003 aaKnown RBP12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 DHCR7Q9UBM7 475 aaKnown RBP12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 COL4A3Q01955 1670 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 MEIS3P1A6NDR6 274 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 ORC5O43913 435 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 YES1P07947 543 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 SSTR2P30874 369 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 HTR2BP41595 481 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 LIMK1P53667 647 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 EEF1A1P68104 462 aaKnown RBP12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 DEFB133Q30KQ1 61 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 ZNF628Q5EBL2 1059 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 EOGTQ5NDL2 527 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 C1orf189Q5VU69 101 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 GID4Q8IVV7 300 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 LMX1AQ8TE12 382 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 THAP4Q8WY91 577 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 DGAT2Q96PD7 388 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 ABHD1Q96SE0 405 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 SLC38A3Q99624 504 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 MED28Q9H204 178 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 FKRPQ9H9S5 495 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 MSRAQ9UJ68 235 aa12.6□□□□□ -0.39
PRPF40B-209ENST00000548825 HMX3A6NHT5 357 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 C5orf67F2Z3F1 127 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 MEN1O00255 615 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 NDUFB5O43674 189 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 IFNGP01579 166 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 IGKV1D-16P01601 117 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 IL9P15248 144 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 DGCR2P98153 550 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 DUSP8Q13202 625 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 PON3Q15166 354 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 Q5BKY6 102 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 CD300LDQ6UXZ3 194 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 TTLL10Q6ZVT0 673 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 TOMM5Q8N4H5 51 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 MSLNLQ96KJ4 702 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 Q96M85 177 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 ULBP3Q9BZM4 244 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 OR2B2Q9GZK3 357 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 TSPAN10Q9H1Z9 355 aaPredicted RBP12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 RBFOX1Q9NWB1 397 aaKnown RBP12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 ING3Q9NXR8 418 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 COQ3Q9NZJ6 369 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 SIGLEC7Q9Y286 467 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms