RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 TRIM8Q9BZR9 551 aa7.83□□□□□ -1.16
SP1-203ENST00000548560 ACER3Q9NUN7 267 aa7.83□□□□□ -1.16
SP1-203ENST00000548560 KLHL28Q9NXS3 571 aa7.83□□□□□ -1.16
SP1-203ENST00000548560 AP3M1Q9Y2T2 418 aa7.83□□□□□ -1.16
SP1-203ENST00000548560 ARL2BPQ9Y2Y0 163 aa7.83□□□□□ -1.16
SP1-203ENST00000548560 TEX15Q9BXT5 2789 aa7.83□□□□□ -1.16
SP1-203ENST00000548560 USP9YO00507 2555 aaPredicted RBP7.83□□□□□ -1.16
SP1-203ENST00000548560 NKX2-6A6NCS4 301 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 KDM4EB2RXH2 506 aaPredicted RBP7.82□□□□□ -1.16
SP1-203ENST00000548560 EEF1E1-BLOC1S5C9J1V9 151 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 H0YC42 278 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 ETV2O00321 342 aaPredicted RBP7.82□□□□□ -1.16
SP1-203ENST00000548560 FAAHO00519 579 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 AIM2O14862 343 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 EEF1E1O43324 174 aaKnown RBP7.82□□□□□ -1.16
SP1-203ENST00000548560 CXCL13O43927 109 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 DNAJA2O60884 412 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 BCAS1O75363 584 aaPredicted RBP7.82□□□□□ -1.16
SP1-203ENST00000548560 DCTN3O75935 186 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 TOXO94900 526 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 RCBTB2O95199 551 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 NTN1O95631 604 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 PLGP00747 810 aaPredicted RBP7.82□□□□□ -1.16
SP1-203ENST00000548560 OPN1LWP04000 364 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 GKN3PP0CG01 181 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 TFPIP10646 304 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 BMP4P12644 408 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 COX6B1P14854 86 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 CTSSP25774 331 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 FKBP2P26885 142 aaKnown RBP7.82□□□□□ -1.16
SP1-203ENST00000548560 PRKAR1BP31321 381 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 PCGF2P35227 344 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 ASCL1P50553 236 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 NUDT2P50583 147 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 POLR2HP52434 150 aaKnown RBP7.82□□□□□ -1.16
SP1-203ENST00000548560 TPD52P55327 224 aaPredicted RBP7.82□□□□□ -1.16
SP1-203ENST00000548560 EPS8Q12929 822 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 TMEM176BQ3YBM2 270 aaPredicted RBP7.82□□□□□ -1.16
SP1-203ENST00000548560 NANOGP8Q6NSW7 305 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 ERICH5Q6P6B1 374 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 SEM1Q6ZVN7 128 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 PLEKHM3Q6ZWE6 761 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 SYT9Q86SS6 491 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 PATL1Q86TB9 770 aaKnown RBP7.82□□□□□ -1.16
SP1-203ENST00000548560 ARMC8Q8IUR7 673 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 GCNT2Q8N0V5 402 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 C10orf111Q8N326 155 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 CADM2Q8N3J6 435 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 FNDC9Q8TBE3 224 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 SLC26A7Q8TE54 656 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 INTS12Q96CB8 462 aaKnown RBP7.82□□□□□ -1.16
SP1-203ENST00000548560 ZNF845Q96IR2 970 aaPredicted RBP7.82□□□□□ -1.16
SP1-203ENST00000548560 OR5B2Q96R09 309 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 NPAS1Q99742 590 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 CLEC4MQ9H2X3 399 aaPredicted RBP7.82□□□□□ -1.16
SP1-203ENST00000548560 KAT8Q9H7Z6 458 aaKnown RBP7.82□□□□□ -1.16
SP1-203ENST00000548560 NANOGQ9H9S0 305 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 EFCAB1Q9HAE3 211 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 RLIMQ9NVW2 624 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 RPS6KB2Q9UBS0 482 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 ZNF629Q9UEG4 869 aaPredicted RBP7.82□□□□□ -1.16
SP1-203ENST00000548560 CHRNA9Q9UGM1 479 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 PRDM4Q9UKN5 801 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 LRRK2Q5S007 2527 aa7.82□□□□□ -1.16
SP1-203ENST00000548560 A0A0J9YW62 118 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 FAM220BPB1ANY3 271 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 FXYD1O00168 92 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 AP3D1O14617 1153 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 ADAMDEC1O15204 470 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 TGM6O95932 706 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 IL18BPO95998 194 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 CRHP06850 196 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 IL11P20809 199 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 PRDX6P30041 224 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 SLC1A3P43003 542 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 CPA2P48052 419 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 ZNF136P52737 540 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 CTBP2P56545 445 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 CARD18P57730 90 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 RGS8P57771 180 aaPredicted RBP7.81□□□□□ -1.16
SP1-203ENST00000548560 CSNK2A1P68400 391 aaPredicted RBP7.81□□□□□ -1.16
SP1-203ENST00000548560 CDSNQ15517 529 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 ADRM1Q16186 407 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 ZNF239Q16600 458 aaKnown RBP7.81□□□□□ -1.16
SP1-203ENST00000548560 VMACQ2NL98 169 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 CTU2Q2VPK5 515 aaKnown RBP7.81□□□□□ -1.16
SP1-203ENST00000548560 SYT14P1Q58G82 188 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 RABL3Q5HYI8 236 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 GKAP1Q5VSY0 366 aaPredicted RBP7.81□□□□□ -1.16
SP1-203ENST00000548560 GTF2IRD2BQ6EKJ0 949 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 WBP2NLQ6ICG8 309 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 DHRS4L2Q6PKH6 230 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 PLXDC2Q6UX71 529 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 NET1Q7Z628 596 aaPredicted RBP7.81□□□□□ -1.16
SP1-203ENST00000548560 GTF2IRD2Q86UP8 949 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 RANBP3LQ86VV4 465 aaPredicted RBP7.81□□□□□ -1.16
SP1-203ENST00000548560 PTOV1Q86YD1 416 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 ZZZ3Q8IYH5 903 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 CNEP1R1Q8N9A8 125 aa7.81□□□□□ -1.16
SP1-203ENST00000548560 NAXEQ8NCW5 288 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms