RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 CLLU1OSQ5K130 101 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 LIN9Q5TKA1 542 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 ASPHD2Q6ICH7 369 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 GRAMD2AQ8IUY3 354 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 SPEM1Q8N4L4 309 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 RFESDQ8TAC1 157 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 ZNF671Q8TAW3 534 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 AGAP11Q8TF27 550 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 SYAP1Q96A49 352 aaPredicted RBP3.12□□□□□ -1.91
PTCH1-216ENST00000548379 UPRTQ96BW1 309 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 TRIM44Q96DX7 344 aaPredicted RBP3.12□□□□□ -1.91
PTCH1-216ENST00000548379 DTNBP1Q96EV8 351 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 ZBED6CLQ96FA7 236 aaPredicted RBP3.12□□□□□ -1.91
PTCH1-216ENST00000548379 PYGO2Q9BRQ0 406 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 HCAR1Q9BXC0 346 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 COMMD4Q9H0A8 199 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 SLC25A51Q9H1U9 297 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 WDR76Q9H967 626 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 POLD4Q9HCU8 107 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 C6orf50Q9HD87 102 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.12□□□□□ -1.91
PTCH1-216ENST00000548379 C1orf123Q9NWV4 160 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 NAP1L2Q9ULW6 460 aaPredicted RBP3.12□□□□□ -1.91
PTCH1-216ENST00000548379 CHD9Q3L8U1 2897 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 PPIHO43447 177 aaKnown RBP3.11□□□□□ -1.91
PTCH1-216ENST00000548379 CHMP2AO43633 222 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 NOL3O60936 208 aaKnown RBP3.11□□□□□ -1.91
PTCH1-216ENST00000548379 PRAMEF12O95522 483 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 CCNE2O96020 404 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 OPN1LWP04000 364 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 GSTT2P0CG29 244 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 GSTT2BP0CG30 244 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 CALCBP10092 127 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 LAMP1P11279 417 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 BCKDHAP12694 445 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 XRCC1P18887 633 aaPredicted RBP3.11□□□□□ -1.91
PTCH1-216ENST00000548379 TNNI3P19429 210 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 SLC11A1P49279 550 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 ARHGDIBP52566 201 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 DSCR10P59022 87 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 ELP6Q0PNE2 266 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 CRMP1Q14194 572 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 DPYSL3Q14195 570 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 C15orf32Q32M92 178 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 ANKDD1AQ495B1 522 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 PPM1LQ5SGD2 360 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 DCST2Q5T1A1 773 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 LGSNQ5TDP6 509 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 GCNT7Q6ZNI0 430 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 CENPUQ71F23 418 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 ANKRD37Q7Z713 158 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 CDC20BQ86Y33 519 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 CENPLQ8N0S6 344 aaPredicted RBP3.11□□□□□ -1.91
PTCH1-216ENST00000548379 STKLD1Q8NE28 680 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 CCDC148Q8NFR7 591 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 IPMKQ8NFU5 416 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 NANPQ8TBE9 248 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 N4BP2L2Q92802 583 aaPredicted RBP3.11□□□□□ -1.91
PTCH1-216ENST00000548379 APOL2Q9BQE5 337 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 SLC30A2Q9BRI3 323 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 TMEM121Q9BTD3 319 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 ZNF416Q9BWM5 594 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 TEKT3Q9BXF9 490 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 NT5C3AQ9H0P0 336 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 OPN3Q9H1Y3 402 aaPredicted RBP3.11□□□□□ -1.91
PTCH1-216ENST00000548379 EXOSC3Q9NQT5 275 aaKnown RBP3.11□□□□□ -1.91
PTCH1-216ENST00000548379 PRG3Q9Y2Y8 225 aaPredicted RBP3.11□□□□□ -1.91
PTCH1-216ENST00000548379 GMPPBQ9Y5P6 360 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 FOCADQ5VW36 1801 aa3.11□□□□□ -1.91
PTCH1-216ENST00000548379 LAMA2P24043 3122 aaKnown RBP3.1□□□□□ -1.91
PTCH1-216ENST00000548379 DNAH12Q6ZR08 3092 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 PLXNA1Q9UIW2 1896 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 TRIM49BA6NDI0 452 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 ZSCAN5CA6NGD5 496 aaPredicted RBP3.1□□□□□ -1.91
PTCH1-216ENST00000548379 ZSCAN5BA6NJL1 495 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 LCMT2O60294 686 aaKnown RBP3.1□□□□□ -1.91
PTCH1-216ENST00000548379 JAK2O60674 1132 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 TSC22D2O75157 780 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 MFN2O95140 757 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 RETP07949 1114 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 UMPSP11172 480 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 H2AFXP16104 143 aaPredicted RBP3.1□□□□□ -1.91
PTCH1-216ENST00000548379 SDC1P18827 310 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 HMGCLP35914 325 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 RPL4P36578 427 aaKnown RBP3.1□□□□□ -1.91
PTCH1-216ENST00000548379 RPS9P46781 194 aaKnown RBP3.1□□□□□ -1.91
PTCH1-216ENST00000548379 PAX2Q02962 417 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 OVGP1Q12889 678 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 RUNX3Q13761 415 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 Q1RN00 199 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 TMEM52BQ4KMG9 183 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 FAM120AOSQ5T036 256 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 SULT1C3Q6IMI6 304 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 CYS1Q717R9 158 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 OTUD6AQ7L8S5 288 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 HSD11B1LQ7Z5J1 315 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 PARGQ86W56 976 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 GPR65Q8IYL9 337 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 TBC1D21Q8IYX1 336 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 HPDLQ96IR7 371 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms