RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 CSNK2A1P68400 391 aaPredicted RBP10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 LSM12Q3MHD2 195 aaKnown RBP10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 ELOA3BQ3SY89 546 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 SYT14P1Q58G82 188 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 IL23RQ5VWK5 629 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 C6orf120Q7Z4R8 191 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 MTDHQ86UE4 582 aaKnown RBP10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 ELOA3Q8NG57 546 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 C10orf105Q8TEF2 133 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 FBXO17Q96EF6 278 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 ARL5BQ96KC2 179 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 PPP3R2Q96LZ3 170 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 C3orf30Q96M34 536 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 AMBRA1Q9C0C7 1298 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 OR11A1Q9GZK7 315 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 LAT2Q9GZY6 243 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 ASB6Q9NWX5 421 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 UPB1Q9UBR1 384 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 ZDHHC2Q9UIJ5 367 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 V9GYY5 206 aaPredicted RBP10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 LOC100289279A0A1B0GTE1 492 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 BCAS1O75363 584 aaPredicted RBP10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 UGT2B17O75795 530 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 BPGMP07738 259 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 KRT16P08779 473 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 DDX5P17844 614 aaKnown RBP10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 SRD5A1P18405 259 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 PGCP20142 388 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 IGFBP5P24593 272 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 EFNA4P52798 201 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 HBA1P69905 142 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 SKP2Q13309 424 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 GABRA6Q16445 453 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 ATP6AP1LQ52LC2 224 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 XKR7Q5GH72 579 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 C6orf136Q5SQH8 315 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 EMBQ6PCB8 327 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 CLECL1Q8IZS7 167 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 WDR31Q8NA23 367 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 FNDC5Q8NAU1 212 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 TMEM234Q8WY98 164 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 INPP5KQ9BT40 448 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 DUSP26Q9BV47 211 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 SERHL2Q9H4I8 314 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 ACER3Q9NUN7 267 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 EMC3Q9P0I2 261 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 PMF1-BGLAPU3KQ54 211 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 DYSFO75923 2080 aa10.49□□□□□ -0.73
TRAFD1-205ENST00000548277 ZNF716A6NP11 495 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 ATP6V1G2-DDX39BF2Z307 99 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 KLF11O14901 512 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 TYROBPO43914 113 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 STX11O75558 287 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 CPSF4O95639 269 aaKnown RBP10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 ITGA5P08648 1049 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 OR12D1P0DN82 309 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 APOBEC3AP31941 199 aaPredicted RBP10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 SERPINB5P36952 375 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 RPL3P39023 403 aaKnown RBP10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 CHRNB3Q05901 458 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 ZNF141Q15928 474 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 MAPK14Q16539 360 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 IQCCQ4KMZ1 466 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 OR4F3Q6IEY1 312 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 WDR93Q6P2C0 686 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 CASP12Q6UXS9 341 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 C16orf62Q7Z3J2 963 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 NUDCD3Q8IVD9 361 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 XAGE5Q8WWM1 108 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 ST8SIA1Q92185 356 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 RAB8BQ92930 207 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 COQ8BQ96D53 544 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 ZHX1-C8orf76Q96EF9 292 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 SLC35G5Q96KT7 338 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 PPP1R36Q96LQ0 422 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 MUS81Q96NY9 551 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 FOXN4Q96NZ1 517 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 PRPF18Q99633 342 aaKnown RBP10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 VRK1Q99986 396 aaPredicted RBP10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 TMEM109Q9BVC6 243 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 OR51I1Q9H343 314 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 ATAD3AQ9NVI7 634 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 TAS2R16Q9NYV7 291 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 LPAR3Q9UBY5 353 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 KCNS2Q9ULS6 477 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 MOKQ9UQ07 419 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 MXRA5Q9NR99 2828 aa10.48□□□□□ -0.73
TRAFD1-205ENST00000548277 GOLGA8QA0A0J9YX86 632 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 WDR91A4D1P6 747 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 GOLGA8OA6NCC3 632 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 CLDN24A6NM45 220 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 GOLGA8NF8WBI6 632 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 LYPLA1O75608 230 aaPredicted RBP10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 G6PDP11413 515 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 APEHP13798 732 aaKnown RBP10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 APOBEC1P41238 236 aaKnown RBP10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 ETV4P43268 484 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 MAGEA8P43361 318 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 PDLIM4P50479 330 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms