RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 COL19A1Q14993 1142 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 ELOCQ15369 112 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 IDNKQ5T6J7 187 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 C17orf47Q8NEP4 570 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 OR52E2Q8NGJ4 325 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 OR4C3Q8NH37 302 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 SGTBQ96EQ0 304 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 MMABQ96EY8 250 aaPredicted RBP14.26□□□□□ -0.13
BRF1-212ENST00000547562 ITGB1BP2Q9UKP3 347 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 A0A087WUJ7 227 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 SERINC4A6NH21 518 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 CSF2P04141 144 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 HIST1H1CP16403 213 aaKnown RBP14.26□□□□□ -0.13
BRF1-212ENST00000547562 SHC1P29353 583 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 HSD17B7P56937 341 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 FAM27D1Q5T7N8 215 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 SSX6Q7RTT6 188 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 UBE2J2Q8N2K1 259 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 METTL27Q8N6F8 245 aaPredicted RBP14.26□□□□□ -0.13
BRF1-212ENST00000547562 SDR9C7Q8NEX9 313 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 OR4K13Q8NH42 304 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 ENKURQ8TC29 256 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 PGLYRP3Q96LB9 341 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 UCK1Q9HA47 277 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 ICAM5Q9UMF0 924 aa14.26□□□□□ -0.13
BRF1-212ENST00000547562 HTR3EA5X5Y0 456 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 WNT1P04628 370 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 TRAPPC2P0DI81 140 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 TRAPPC2BP0DI82 140 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 ELK1P19419 428 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 MLLT3P42568 568 aaPredicted RBP14.25□□□□□ -0.13
BRF1-212ENST00000547562 GAS6Q14393 721 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 RPTNQ6XPR3 784 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 ZNF615Q8N8J6 731 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 FAM98AQ8NCA5 519 aaKnown RBP14.25□□□□□ -0.13
BRF1-212ENST00000547562 OR5J2Q8NH18 312 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 ABHD4Q8TB40 342 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 ZNF486Q96H40 463 aaPredicted RBP14.25□□□□□ -0.13
BRF1-212ENST00000547562 SLC38A3Q99624 504 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 TPSD1Q9BZJ3 242 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 RNF121Q9H920 327 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 PLCL2Q9UPR0 1127 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 TMEM184BQ9Y519 407 aaPredicted RBP14.25□□□□□ -0.13
BRF1-212ENST00000547562 IER3IP1Q9Y5U9 82 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 PRUNE2Q8WUY3 3088 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 IGHV1OR15-9A0A0B4J2B8 117 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 LILRA5A6NI73 299 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 FAM25AB3EWG3 89 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 FAM25CB3EWG5 89 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 FAM25GB3EWG6 89 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 MCIDASD6RGH6 385 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 SC5DO75845 299 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 IFNA16P05015 189 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 NME1P15531 152 aaKnown RBP14.25□□□□□ -0.13
BRF1-212ENST00000547562 MYL9P24844 172 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 PYCR1P32322 319 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 DDOSTP39656 456 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 MAP2K3P46734 347 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.25□□□□□ -0.13
BRF1-212ENST00000547562 DMKNQ6E0U4 476 aaPredicted RBP14.25□□□□□ -0.13
BRF1-212ENST00000547562 CEACAM19Q7Z692 300 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 PXKQ7Z7A4 578 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 TPRA1Q86W33 373 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 LRRC17Q8N6Y2 441 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 TSTD1Q8NFU3 115 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 OR51Q1Q8NH59 317 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 KCTD12Q96CX2 325 aaKnown RBP14.25□□□□□ -0.13
BRF1-212ENST00000547562 ZMYND19Q96E35 227 aaPredicted RBP14.25□□□□□ -0.13
BRF1-212ENST00000547562 ST6GAL2Q96JF0 529 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 FRMD6Q96NE9 622 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 UBL7Q96S82 380 aaPredicted RBP14.25□□□□□ -0.13
BRF1-212ENST00000547562 TMEM43Q9BTV4 400 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 ZNF576Q9H609 170 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 KLHL21Q9UJP4 597 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 RBMX2Q9Y388 322 aaKnown RBP14.25□□□□□ -0.13
BRF1-212ENST00000547562 NOX1Q9Y5S8 564 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 MTCH2Q9Y6C9 303 aa14.25□□□□□ -0.13
BRF1-212ENST00000547562 HMX3A6NHT5 357 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 CHURC1-FNTBB4DL54 471 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 LRRN3E7EW58 273 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 ACVR1BP36896 505 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 FNTBP49356 437 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 GKN2Q86XP6 184 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 RFLNBQ8N5W9 214 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 LMX1AQ8TE12 382 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 ZC3HAV1LQ96H79 300 aaKnown RBP14.24□□□□□ -0.13
BRF1-212ENST00000547562 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.24□□□□□ -0.13
BRF1-212ENST00000547562 LRRN3Q9H3W5 708 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 RBFOX1Q9NWB1 397 aaKnown RBP14.24□□□□□ -0.13
BRF1-212ENST00000547562 HYAL3O43820 417 aaPredicted RBP14.24□□□□□ -0.13
BRF1-212ENST00000547562 PPM1BO75688 479 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 TFP02787 698 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 CLPSP04118 112 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 THBS2P35442 1172 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 GFERP55789 205 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 NRG3P56975 720 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 GGTLC2Q14390 218 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 QPRTQ15274 297 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 POMGNT2Q8NAT1 580 aa14.24□□□□□ -0.13
BRF1-212ENST00000547562 C3orf49Q96BT1 292 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms