RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 CSNK1DP48730 415 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 RABGGTBP53611 331 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 CTXN1P60606 82 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 ERVK-21P61565 698 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 PDSS1Q5T2R2 415 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 PSRC1Q6PGN9 363 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-212ENST00000546744 TMEM107Q6UX40 140 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 MFSD4AQ8N468 514 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 PLPP5Q8NEB5 264 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 CRB3Q9BUF7 120 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 SLC6A20Q9NP91 592 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 MICAL3Q7RTP6 2002 aa11.98□□□□□ -0.49
PTCH1-212ENST00000546744 C20orf202A1L168 122 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 CPED1A4D0V7 1026 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 RAD1O60671 282 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 PFKMP08237 780 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 ZNF84P51523 738 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 MFGE8Q08431 387 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-212ENST00000546744 UPP1Q16831 310 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 TBPL2Q6SJ96 375 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 OPN5Q6U736 354 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 LILRB2Q8N423 598 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 OR5D14Q8NGL3 314 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 OR6M1Q8NGM8 313 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 GLYATL2Q8WU03 294 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 SAMD10Q9BYL1 202 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 DPH1Q9BZG8 443 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 KLHL13Q9P2N7 655 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 A0A0A6YYH2 397 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 A6NJ64 397 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 IL5P05113 134 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 SYN1P17600 705 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 CRHR2Q13324 411 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 NKPD1Q17RQ9 610 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 FAHD1Q6P587 224 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 CDH26Q8IXH8 852 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 KDM8Q8N371 416 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 KCNRGQ8N5I3 272 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 OR52H1Q8NGJ2 320 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 LHFPL5Q8TAF8 219 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 LGALS14Q8TCE9 139 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 MAN2C1Q9NTJ4 1040 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 POMT2Q9UKY4 750 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 OR5K4A6NMS3 321 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 MT-ND4LP03901 98 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 IMPA1P29218 277 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 GJA5P36382 358 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 RAB28P51157 221 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 PDGFRLQ15198 375 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 SLC5A12Q1EHB4 618 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 CD300LGQ6UXG3 332 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 UCN3Q969E3 161 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 ZMYND19Q96E35 227 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-212ENST00000546744 C14orf79Q96F83 325 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 PGAM5Q96HS1 289 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 NMNAT2Q9BZQ4 307 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 ZDHHC5Q9C0B5 715 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 SLC6A17Q9H1V8 727 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 MYEF2Q9P2K5 600 aaKnown RBP11.97□□□□□ -0.49
PTCH1-212ENST00000546744 SLC7A7Q9UM01 511 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 OR1A2Q9Y585 309 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 ZAR1LA6NP61 321 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 GPR89AB7ZAQ6 455 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 SYT7O43581 403 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 SCO2O43819 266 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 JTBO76095 146 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 GPR89BP0CG08 455 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 GLO1Q04760 184 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 OR4F15Q8NGB8 312 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 APH1BQ8WW43 257 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 FRZBQ92765 325 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 HAS2Q92819 552 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 PMM1Q92871 262 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 GPR78Q96P69 363 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 LMF1Q96S06 567 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 ZNF226Q9NYT6 803 aa11.97□□□□□ -0.49
PTCH1-212ENST00000546744 STRAPQ9Y3F4 350 aaKnown RBP11.97□□□□□ -0.49
PTCH1-212ENST00000546744 MYO10Q9HD67 2058 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 LRIT2A6NDA9 550 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 FXYD1O00168 92 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 PPP6CO00743 305 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 KIAA0355O15063 1070 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 GPX5O75715 221 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 NFYBP25208 207 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 CDKN1CP49918 316 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-212ENST00000546744 ACSM1Q08AH1 577 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 SLC35D3Q5M8T2 416 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 DCST2Q5T1A1 773 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 MDGA2Q7Z553 956 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 HSD17B13Q7Z5P4 300 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-212ENST00000546744 ZNF695Q8IW36 515 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 C1orf87Q8N0U7 546 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 ASB11Q8WXH4 323 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 RSC1A1Q92681 617 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 OCSTAMPQ9BR26 566 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 IL26Q9NPH9 171 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 GMEB2Q9UKD1 530 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 DNMT3AQ9Y6K1 912 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-212ENST00000546744 C8AP07357 584 aa11.96□□□□□ -0.49
PTCH1-212ENST00000546744 CX3CR1P49238 355 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms