RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 TBC1D3DA0A087WVF3 549 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 TBC1D3IA0A087WXS9 549 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 TBC1D3EA0A087X179 549 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 TBC1D3KA0A087X1G2 549 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 TBC1D3FA6NER0 549 aaPredicted RBP13.56□□□□□ -0.24
HOXC11-202ENST00000546378 TBC1D3LB9A6J9 549 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 H0Y8X5 98 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 TBC1D3HP0C7X1 549 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 OR8G3PP0DMU2 310 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 POLR2CP19387 275 aaPredicted RBP13.56□□□□□ -0.24
HOXC11-202ENST00000546378 SLC6A1P30531 599 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 NUP62P37198 522 aaPredicted RBP13.56□□□□□ -0.24
HOXC11-202ENST00000546378 GDI2P50395 445 aaKnown RBP13.56□□□□□ -0.24
HOXC11-202ENST00000546378 ERVK-25P63136 954 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 OPCMLQ14982 345 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 TBC1D3GQ6DHY5 549 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 TBC1D3CQ6IPX1 549 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 HDDC2Q7Z4H3 204 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 LIX1LQ8IVB5 337 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 TBC1D3Q8IZP1 549 aaPredicted RBP13.56□□□□□ -0.24
HOXC11-202ENST00000546378 STPG2Q8N412 459 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 CPNE2Q96FN4 548 aaPredicted RBP13.56□□□□□ -0.24
HOXC11-202ENST00000546378 ASB16Q96NS5 453 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 C20orf85Q9H1P6 137 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 TAS2R10Q9NYW0 307 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 SLC6A5Q9Y345 797 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 SDK2Q58EX2 2172 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 TMEM129A0AVI4 362 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 B8ZZF3 427 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 GOSR2O14653 212 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 THY1P04216 161 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 HIST1H1TP22492 207 aaPredicted RBP13.56□□□□□ -0.24
HOXC11-202ENST00000546378 RPS15P62841 145 aaKnown RBP13.56□□□□□ -0.24
HOXC11-202ENST00000546378 HTR4Q13639 388 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 TMEM69Q5SWH9 247 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 OR4N2Q8NGD1 307 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 LCN9Q8WX39 176 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 CREB3L1Q96BA8 519 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 BPIFA2Q96DR5 249 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 TEAD3Q99594 435 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 SGPP1Q9BX95 441 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 WDR26Q9H7D7 661 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 TDRD6O60522 2096 aaKnown RBP13.56□□□□□ -0.24
HOXC11-202ENST00000546378 TCF20Q9UGU0 1960 aaKnown RBP13.56□□□□□ -0.24
HOXC11-202ENST00000546378 GXYLT2A0PJZ3 443 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 LRIT2A6NDA9 550 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 F13BP05160 661 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 F3P13726 295 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 TYRP1P17643 537 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 ACADLP28330 430 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 CDKL4Q5MAI5 379 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 HBMQ6B0K9 141 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 ZAR1Q86SH2 424 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 LRRC28Q86X40 367 aaPredicted RBP13.56□□□□□ -0.24
HOXC11-202ENST00000546378 FOXRED2Q8IWF2 684 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 CMTM4Q8IZR5 234 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 GOT1L1Q8NHS2 421 aaPredicted RBP13.56□□□□□ -0.24
HOXC11-202ENST00000546378 OR8D1Q8WZ84 308 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 RASD2Q96D21 266 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 RBP7Q96R05 134 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 PTDSS2Q9BVG9 487 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 RETREG1Q9H6L5 497 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 IL21RQ9HBE5 538 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 SERGEFQ9UGK8 458 aa13.56□□□□□ -0.24
HOXC11-202ENST00000546378 ASXL3Q9C0F0 2248 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 UNC13CQ8NB66 2214 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 NUDT14O95848 222 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 ACSM4P0C7M7 580 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 VASNQ6EMK4 673 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 ZNF620Q6ZNG0 422 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 CHCHD4Q8N4Q1 142 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 ACOT11Q8WXI4 607 aaPredicted RBP13.55□□□□□ -0.24
HOXC11-202ENST00000546378 ST8SIA4Q92187 359 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 RADILQ96JH8 1075 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 PDCD10Q9BUL8 212 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 RANBP3Q9H6Z4 567 aaPredicted RBP13.55□□□□□ -0.24
HOXC11-202ENST00000546378 AP1M2Q9Y6Q5 423 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 ZIC2O95409 532 aaPredicted RBP13.55□□□□□ -0.24
HOXC11-202ENST00000546378 NFATC1O95644 943 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 BMP8BP34820 402 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 LIMK1P53667 647 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 FOXK2Q01167 660 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 PLA2G7Q13093 441 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 PRRT3Q5FWE3 981 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 BMP8AQ7Z5Y6 402 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 TMEM239Q8WW34 195 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 RBPMSQ93062 196 aaKnown RBP13.55□□□□□ -0.24
HOXC11-202ENST00000546378 PTP4A1Q93096 173 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 TSACCQ96A04 125 aaPredicted RBP13.55□□□□□ -0.24
HOXC11-202ENST00000546378 CHFRQ96EP1 664 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 CPEB1Q9BZB8 566 aaKnown RBP13.55□□□□□ -0.24
HOXC11-202ENST00000546378 NOX3Q9HBY0 568 aa13.55□□□□□ -0.24
HOXC11-202ENST00000546378 RP1L1Q8IWN7 2480 aaPredicted RBP13.55□□□□□ -0.24
HOXC11-202ENST00000546378 QSOX1O00391 747 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 KHNYNO15037 678 aaKnown RBP13.54□□□□□ -0.24
HOXC11-202ENST00000546378 SLC19A2O60779 497 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 IGF2P01344 180 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 OMPP47874 163 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 SORDQ00796 357 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 PARM1Q6UWI2 310 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms