RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 CLCF1Q9UBD9 225 aa18.4■□□□□ 0.54
HMGA2-211ENST00000545998 TMED7Q9Y3B3 224 aa18.4■□□□□ 0.54
HMGA2-211ENST00000545998 SPIN1Q9Y657 262 aaPredicted RBP18.4■□□□□ 0.54
HMGA2-211ENST00000545998 USP9YO00507 2555 aaPredicted RBP18.39■□□□□ 0.54
HMGA2-211ENST00000545998 INTS1Q8N201 2190 aaKnown RBP18.39■□□□□ 0.54
HMGA2-211ENST00000545998 WIPF3A6NGB9 483 aa18.39■□□□□ 0.53
HMGA2-211ENST00000545998 FMO6PO60774 539 aa18.39■□□□□ 0.53
HMGA2-211ENST00000545998 SERPINA1P01009 418 aa18.39■□□□□ 0.53
HMGA2-211ENST00000545998 TNFRSF1BP20333 461 aa18.39■□□□□ 0.53
HMGA2-211ENST00000545998 FKBP2P26885 142 aaKnown RBP18.39■□□□□ 0.53
HMGA2-211ENST00000545998 EIF1AXP47813 144 aaKnown RBP18.39■□□□□ 0.53
HMGA2-211ENST00000545998 PER3P56645 1201 aa18.39■□□□□ 0.53
HMGA2-211ENST00000545998 RPS3AP61247 264 aaKnown RBP18.39■□□□□ 0.53
HMGA2-211ENST00000545998 OR1Q1Q15612 314 aa18.39■□□□□ 0.53
HMGA2-211ENST00000545998 SYT14P1Q58G82 188 aa18.39■□□□□ 0.53
HMGA2-211ENST00000545998 PLXDC2Q6UX71 529 aa18.39■□□□□ 0.53
HMGA2-211ENST00000545998 CHMP1BQ7LBR1 199 aa18.39■□□□□ 0.53
HMGA2-211ENST00000545998 ATG4DQ86TL0 474 aaPredicted RBP18.39■□□□□ 0.53
HMGA2-211ENST00000545998 LSRQ86X29 649 aaPredicted RBP18.39■□□□□ 0.53
HMGA2-211ENST00000545998 CARM1Q86X55 608 aa18.39■□□□□ 0.53
HMGA2-211ENST00000545998 OR10Q1Q8NGQ4 319 aa18.39■□□□□ 0.53
HMGA2-211ENST00000545998 VANGL1Q8TAA9 524 aaPredicted RBP18.39■□□□□ 0.53
HMGA2-211ENST00000545998 ZNF845Q96IR2 970 aaPredicted RBP18.39■□□□□ 0.53
HMGA2-211ENST00000545998 TPD52L3Q96J77 140 aa18.39■□□□□ 0.53
HMGA2-211ENST00000545998 GORASP2Q9H8Y8 452 aa18.39■□□□□ 0.53
HMGA2-211ENST00000545998 ADPRHL2Q9NX46 363 aa18.39■□□□□ 0.53
HMGA2-211ENST00000545998 PRPF19Q9UMS4 504 aaKnown RBP18.39■□□□□ 0.53
HMGA2-211ENST00000545998 SLC9A8Q9Y2E8 581 aa18.39■□□□□ 0.53
HMGA2-211ENST00000545998 SH3GLB1Q9Y371 365 aa18.39■□□□□ 0.53
HMGA2-211ENST00000545998 ADGRG4Q8IZF6 3080 aa18.39■□□□□ 0.53
HMGA2-211ENST00000545998 A0A1B0GWA3 101 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 TMEM72A0PK05 275 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 ZNF208O43345 1280 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 ZG16O60844 167 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 TIMP3P35625 211 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 MAP2K6P52564 334 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 PDSS1Q5T2R2 415 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 HBMQ6B0K9 141 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 LZICQ8WZA0 190 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 MCHR1Q99705 422 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 PCDHAC1Q9H158 963 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 COQ10BQ9H8M1 238 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 PAQR5Q9NXK6 330 aaPredicted RBP18.38■□□□□ 0.53
HMGA2-211ENST00000545998 RPS6KB2Q9UBS0 482 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 MAGEL2Q9UJ55 1249 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 MBD3L4A6NDZ8 208 aaPredicted RBP18.38■□□□□ 0.53
HMGA2-211ENST00000545998 MBD3L3A6NE82 208 aaPredicted RBP18.38■□□□□ 0.53
HMGA2-211ENST00000545998 MBD3L5A6NJ08 208 aaPredicted RBP18.38■□□□□ 0.53
HMGA2-211ENST00000545998 CXCL13O43927 109 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 TOXO94900 526 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 ZNF682O95780 498 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 RNF224P0DH78 156 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 CCNA2P20248 432 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 CXCR1P25024 350 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 SLC7A1P30825 629 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 CARD18P57730 90 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 VTCN1Q7Z7D3 282 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 C9orf106Q8NAJ2 232 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 MBD3L2Q8NHZ7 208 aaPredicted RBP18.38■□□□□ 0.53
HMGA2-211ENST00000545998 DNAJA4Q8WW22 397 aaPredicted RBP18.38■□□□□ 0.53
HMGA2-211ENST00000545998 OSTF1Q92882 214 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 WNT2BQ93097 391 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 OR11A1Q9GZK7 315 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 C12orf10Q9HB07 376 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 TMEM27Q9HBJ8 222 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 DCAF13Q9NV06 445 aaKnown RBP18.38■□□□□ 0.53
HMGA2-211ENST00000545998 ZNF175Q9Y473 711 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 SNX13Q9Y5W8 968 aa18.38■□□□□ 0.53
HMGA2-211ENST00000545998 A0A0B4J2E0 115 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 A0A1B0GX12 115 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 A0A1W2PNR3 127 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 ARPC2O15144 300 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 GYG2O15488 501 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 GMNNO75496 209 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 TGM6O95932 706 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 OR1E2P47887 323 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 CLK1P49759 484 aaKnown RBP18.37■□□□□ 0.53
HMGA2-211ENST00000545998 SGCBQ16585 318 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 ENTPD8Q5MY95 495 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 RIPPLY2Q5TAB7 128 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 ULK3Q6PHR2 472 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 TSPYL5Q86VY4 417 aaPredicted RBP18.37■□□□□ 0.53
HMGA2-211ENST00000545998 RND1Q92730 232 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 OR5B2Q96R09 309 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 BTBD10Q9BSF8 475 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 RPS6KA6Q9UK32 745 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 BAHCC1Q9P281 2608 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 DOPEY2Q9Y3R5 2298 aa18.37■□□□□ 0.53
HMGA2-211ENST00000545998 SLC22A20A6NK97 555 aa18.36■□□□□ 0.53
HMGA2-211ENST00000545998 PDE5AO76074 875 aa18.36■□□□□ 0.53
HMGA2-211ENST00000545998 CEACAM8P31997 349 aaPredicted RBP18.36■□□□□ 0.53
HMGA2-211ENST00000545998 BNIP2Q12982 314 aa18.36■□□□□ 0.53
HMGA2-211ENST00000545998 PON3Q15166 354 aa18.36■□□□□ 0.53
HMGA2-211ENST00000545998 DNAL1Q4LDG9 190 aa18.36■□□□□ 0.53
HMGA2-211ENST00000545998 ALG10BQ5I7T1 473 aa18.36■□□□□ 0.53
HMGA2-211ENST00000545998 ZNF613Q6PF04 617 aa18.36■□□□□ 0.53
HMGA2-211ENST00000545998 FNDC9Q8TBE3 224 aa18.36■□□□□ 0.53
HMGA2-211ENST00000545998 SSC4DQ8WTU2 575 aa18.36■□□□□ 0.53
HMGA2-211ENST00000545998 ITLN2Q8WWU7 325 aaPredicted RBP18.36■□□□□ 0.53
HMGA2-211ENST00000545998 DDIT4LQ96D03 193 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms