RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 OR4K14Q8NGD5 310 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 OR13C5Q8NGS8 318 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 ZNF671Q8TAW3 534 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 PELI1Q96FA3 418 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 PEX11GQ96HA9 241 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 CNN2Q99439 309 aaKnown RBP8.08□□□□□ -1.12
TDP1-204ENST00000545686 STACQ99469 402 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 C6orf106Q9H6K1 298 aaPredicted RBP8.08□□□□□ -1.12
TDP1-204ENST00000545686 AUNIPQ9H7T9 357 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 LIN7BQ9HAP6 207 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 HRASLSQ9HDD0 168 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 POLE3Q9NRF9 147 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 DUSP22Q9NRW4 184 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 PHPT1Q9NRX4 125 aaPredicted RBP8.08□□□□□ -1.12
TDP1-204ENST00000545686 KLHL9Q9P2J3 617 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 DEC1Q9P2X7 70 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 SERTAD3Q9UJW9 196 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 C19orf53Q9UNZ5 99 aaPredicted RBP8.08□□□□□ -1.12
TDP1-204ENST00000545686 TP53BP1Q12888 1972 aaPredicted RBP8.08□□□□□ -1.12
TDP1-204ENST00000545686 CENPVL1A0A0U1RR11 272 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 hCG_1807616A0A1W2PRN6 198 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 IGLON5A6NGN9 336 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 CDK2AP1O14519 115 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 PPP1R3DO95685 299 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 HPXP02790 462 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 CEBPBP17676 345 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 MAT2AP31153 395 aaKnown RBP8.08□□□□□ -1.12
TDP1-204ENST00000545686 MNDAP41218 407 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 SELENOPP49908 381 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 MECP2P51608 486 aaKnown RBP8.08□□□□□ -1.12
TDP1-204ENST00000545686 CLDN2P57739 230 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 RAP2BP61225 183 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 TSPAN5P62079 268 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 RPS15AP62244 130 aaKnown RBP8.08□□□□□ -1.12
TDP1-204ENST00000545686 RPS11P62280 158 aaKnown RBP eCLIP8.08□□□□□ -1.12
TDP1-204ENST00000545686 SIRPAP78324 504 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 MESP2Q0VG99 397 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 OPCMLQ14982 345 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 TJAP1Q5JTD0 557 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 NUDT18Q6ZVK8 323 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 USP53Q70EK8 1073 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 SSX6Q7RTT6 188 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 PRSS42Q7Z5A4 293 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 BEST4Q8NFU0 473 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 LHFPL5Q8TAF8 219 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 RPS4Y2Q8TD47 263 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 C15orf40Q8WUR7 153 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 SUSD6Q92537 303 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 ZNF578Q96N58 590 aaPredicted RBP8.08□□□□□ -1.12
TDP1-204ENST00000545686 PRSS16Q9NQE7 514 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 EVA1BQ9NVM1 165 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 KCMF1Q9P0J7 381 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 ICAM5Q9UMF0 924 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 CLEC4AQ9UMR7 237 aa8.08□□□□□ -1.12
TDP1-204ENST00000545686 A0A087WV62 115 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 PLSCR5A0PG75 271 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 SNRPGP15A8MWD9 76 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 AIPO00170 330 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 SCO1O75880 301 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 KRT33AO76009 404 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 CFDP00746 253 aaPredicted RBP8.07□□□□□ -1.12
TDP1-204ENST00000545686 TFP02787 698 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 IL5P05113 134 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 IFNGR1P15260 489 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 PTNP21246 168 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 DRD5P21918 477 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 SOX9P48436 509 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 ZNF267Q14586 743 aaPredicted RBP8.07□□□□□ -1.12
TDP1-204ENST00000545686 ZSWIM7Q19AV6 140 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 TCTE1Q5JU00 501 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 FHL5Q5TD97 284 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 FAM199XQ6PEV8 388 aaPredicted RBP8.07□□□□□ -1.12
TDP1-204ENST00000545686 FAM198BQ6UWH4 519 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 GLDNQ6ZMI3 551 aaPredicted RBP8.07□□□□□ -1.12
TDP1-204ENST00000545686 LINGO2Q7L985 606 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 PAQR7Q86WK9 346 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 CMTM4Q8IZR5 234 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 CDRT4Q8N9R6 151 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 WBP1Q96G27 269 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 LRRC3BQ96PB8 259 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 SERINC2Q96SA4 455 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 DDOQ99489 341 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 ZNF426Q9BUY5 554 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 RBCK1Q9BYM8 510 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 KIR3DX1Q9H7L2 352 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 SYNPO2LQ9H987 977 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 TMEM27Q9HBJ8 222 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 GPN1Q9HCN4 374 aaPredicted RBP8.07□□□□□ -1.12
TDP1-204ENST00000545686 RCE1Q9Y256 329 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 HEBP2Q9Y5Z4 205 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 SESN1Q9Y6P5 492 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 TRAV27A0A087WT01 109 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 A0A0B4J203 849 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 A0A0B4J2E0 115 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 A0A1B0GX12 115 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 HIDE1A8MVS5 230 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 LDOC1O95751 146 aaPredicted RBP8.07□□□□□ -1.12
TDP1-204ENST00000545686 IFNA16P05015 189 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 RAB40ALP0C0E4 278 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 GKN3PP0CG01 181 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms