RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 MTNR1AP48039 350 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 LTBQ06643 244 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 BIKQ13323 160 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 TUBA3CQ13748 450 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 IL11RAQ14626 422 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 TBCEQ15813 527 aaPredicted RBP12.48□□□□□ -0.41
HCFC2-202ENST00000544223 ZNF528Q3MIS6 628 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 TMEM201Q5SNT2 666 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 ZNF362Q5T0B9 420 aaPredicted RBP12.48□□□□□ -0.41
HCFC2-202ENST00000544223 FAM198BQ6UWH4 519 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 DHRS13Q6UX07 377 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 TMPRSS11FQ6ZWK6 438 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 FAM71CQ8NEG0 241 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 ATP6V1C2Q8NEY4 427 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 ZNF420Q8TAQ5 688 aaPredicted RBP12.48□□□□□ -0.41
HCFC2-202ENST00000544223 TRUB1Q8WWH5 349 aaKnown RBP12.48□□□□□ -0.41
HCFC2-202ENST00000544223 NR4A3Q92570 626 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 PTP4A1Q93096 173 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 TMEM80Q96HE8 168 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 CENPOQ9BU64 300 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 OR11A1Q9GZK7 315 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 CCDC86Q9H6F5 360 aaKnown RBP12.48□□□□□ -0.41
HCFC2-202ENST00000544223 VDAC3Q9Y277 283 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 CFL2Q9Y281 166 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 RPL36Q9Y3U8 105 aaKnown RBP12.48□□□□□ -0.41
HCFC2-202ENST00000544223 LOXL2Q9Y4K0 774 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 MAGEB4O15481 346 aaPredicted RBP12.47□□□□□ -0.41
HCFC2-202ENST00000544223 ACP1P24666 158 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 TTKP33981 857 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 ERVK-25P63136 954 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 CSNK2BP67870 215 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 CRMP1Q14194 572 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 SSX1Q16384 188 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 OCLNQ16625 522 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 CXXC5Q7LFL8 322 aaKnown RBP12.47□□□□□ -0.41
HCFC2-202ENST00000544223 TIPARPQ7Z3E1 657 aaKnown RBP12.47□□□□□ -0.41
HCFC2-202ENST00000544223 ANKRD13BQ86YJ7 626 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 OR10G3Q8NGC4 313 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 RAB2BQ8WUD1 216 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 RASD2Q96D21 266 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 Q96MT0 163 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 MGLLQ99685 303 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 FAM86C1Q9NVL1 165 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 C14orf105Q9NVL8 296 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 ANKRD10Q9NXR5 420 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 MED11Q9P086 117 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 SLC35A3Q9Y2D2 325 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 G3V3Y1 287 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 ADAM10O14672 748 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 HIST1H1CP16403 213 aaKnown RBP12.47□□□□□ -0.41
HCFC2-202ENST00000544223 AQP2P41181 271 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 PSMD4P55036 377 aaKnown RBP12.47□□□□□ -0.41
HCFC2-202ENST00000544223 SLC26A5P58743 744 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 RPS7P62081 194 aaKnown RBP12.47□□□□□ -0.41
HCFC2-202ENST00000544223 ZNF791Q3KP31 576 aaPredicted RBP12.47□□□□□ -0.41
HCFC2-202ENST00000544223 AADACL4Q5VUY2 407 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 LIPKQ5VXJ0 399 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 SLC46A3Q7Z3Q1 461 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 ATG4DQ86TL0 474 aaPredicted RBP12.47□□□□□ -0.41
HCFC2-202ENST00000544223 NAXDQ8IW45 347 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 RNF113BQ8IZP6 322 aaKnown RBP12.47□□□□□ -0.41
HCFC2-202ENST00000544223 OR52L1Q8NGH7 329 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 OR5M1Q8NGP8 315 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 SLC39A7Q92504 469 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 PMM1Q92871 262 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 ERMAPQ96PL5 475 aaPredicted RBP12.47□□□□□ -0.41
HCFC2-202ENST00000544223 ICAM5Q9UMF0 924 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 IER3IP1Q9Y5U9 82 aa12.47□□□□□ -0.41
HCFC2-202ENST00000544223 FREM3P0C091 2139 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 SMIM30A4D0T7 59 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 H7C1C5 153 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 PRODHO43272 600 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 AHCYL1O43865 530 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 FADS1O60427 444 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 KLK3P07288 261 aaPredicted RBP12.46□□□□□ -0.41
HCFC2-202ENST00000544223 RPL4P36578 427 aaKnown RBP12.46□□□□□ -0.41
HCFC2-202ENST00000544223 RGS6P49758 472 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 CTBP2P56545 445 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 LCN6P62502 163 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 INSM1Q01101 510 aaPredicted RBP12.46□□□□□ -0.41
HCFC2-202ENST00000544223 MC2RQ01718 297 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 ARSKQ6UWY0 536 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 DBX2Q6ZNG2 339 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 MRGPREQ86SM8 312 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 RFLNBQ8N5W9 214 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 BRIX1Q8TDN6 353 aaKnown RBP12.46□□□□□ -0.41
HCFC2-202ENST00000544223 TAAR8Q969N4 342 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 SLC25A36Q96CQ1 311 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 TRMT61AQ96FX7 289 aaKnown RBP12.46□□□□□ -0.41
HCFC2-202ENST00000544223 OPALINQ96PE5 141 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 EDEM2Q9BV94 578 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 CDCA4Q9BXL8 241 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 SEMA4CQ9C0C4 833 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 OCEL1Q9H607 264 aa12.46□□□□□ -0.41
HCFC2-202ENST00000544223 GPN3Q9UHW5 284 aaPredicted RBP12.46□□□□□ -0.41
HCFC2-202ENST00000544223 KMT2EQ8IZD2 1858 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 STK17BO94768 372 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 LALBAP00709 142 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 F10P00742 488 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 CDK4P11802 303 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms