RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 AKAP6Q13023 2319 aa17.02■□□□□ 0.32
SPPL3-208ENST00000543854 SMAD9O15198 467 aaKnown RBP17.02■□□□□ 0.32
SPPL3-208ENST00000543854 HRGP04196 525 aa17.02■□□□□ 0.32
SPPL3-208ENST00000543854 SLC1A3P43003 542 aa17.02■□□□□ 0.32
SPPL3-208ENST00000543854 POU4F3Q15319 338 aa17.02■□□□□ 0.32
SPPL3-208ENST00000543854 HSP90B2PQ58FF3 399 aa17.02■□□□□ 0.32
SPPL3-208ENST00000543854 GCNT6Q5T4J0 391 aa17.02■□□□□ 0.32
SPPL3-208ENST00000543854 TUSC5Q8IXB3 177 aa17.02■□□□□ 0.32
SPPL3-208ENST00000543854 NINJ1Q92982 152 aa17.02■□□□□ 0.32
SPPL3-208ENST00000543854 WFIKKN1Q96NZ8 548 aa17.02■□□□□ 0.32
SPPL3-208ENST00000543854 ZNF385DQ9H6B1 395 aa17.02■□□□□ 0.32
SPPL3-208ENST00000543854 BCO1Q9HAY6 547 aa17.02■□□□□ 0.32
SPPL3-208ENST00000543854 VAPAQ9P0L0 249 aa17.02■□□□□ 0.32
SPPL3-208ENST00000543854 ZNF232Q9UNY5 417 aa17.02■□□□□ 0.32
SPPL3-208ENST00000543854 IFT52Q9Y366 437 aa17.02■□□□□ 0.32
SPPL3-208ENST00000543854 CELSR1Q9NYQ6 3014 aa17.02■□□□□ 0.31
SPPL3-208ENST00000543854 ABCA4P78363 2273 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 TRBV5-3A0A0A0MS03 114 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 TMED7-TICAM2A0A0A6YYA0 188 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 ANGPT2O15123 496 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 CYTIPO60759 359 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 PMS2P2O95744 297 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 YES1P07947 543 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 TROVE2P10155 538 aaKnown RBP eCLIP17.01■□□□□ 0.31
SPPL3-208ENST00000543854 CCNA2P20248 432 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 TACR3P29371 465 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 CLK1P49759 484 aaKnown RBP17.01■□□□□ 0.31
SPPL3-208ENST00000543854 RASGEF1BQ0VAM2 473 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 TFAP2EQ6VUC0 442 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 ZNF550Q7Z398 422 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 ADGRG3Q86Y34 549 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 DDIT4LQ96D03 193 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 PSD2Q9BQI7 771 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 OR11A1Q9GZK7 315 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 BCL2L10Q9HD36 194 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 ST6GALNAC2Q9UJ37 374 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 LEF1Q9UJU2 399 aaPredicted RBP17.01■□□□□ 0.31
SPPL3-208ENST00000543854 OSGIN1Q9UJX0 560 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 TMED7Q9Y3B3 224 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 GMEB1Q9Y692 573 aa17.01■□□□□ 0.31
SPPL3-208ENST00000543854 EVPLLA8MZ36 301 aa17■□□□□ 0.31
SPPL3-208ENST00000543854 DNPH1O43598 174 aa17■□□□□ 0.31
SPPL3-208ENST00000543854 GKN3PP0CG01 181 aa17■□□□□ 0.31
SPPL3-208ENST00000543854 PPP3CBP16298 524 aa17■□□□□ 0.31
SPPL3-208ENST00000543854 KLK2P20151 261 aa17■□□□□ 0.31
SPPL3-208ENST00000543854 MAP2K6P52564 334 aa17■□□□□ 0.31
SPPL3-208ENST00000543854 COPZ1P61923 177 aa17■□□□□ 0.31
SPPL3-208ENST00000543854 ZNF311Q5JNZ3 666 aa17■□□□□ 0.31
SPPL3-208ENST00000543854 METTL21CQ5VZV1 264 aa17■□□□□ 0.31
SPPL3-208ENST00000543854 ABLIM2Q6H8Q1 611 aa17■□□□□ 0.31
SPPL3-208ENST00000543854 STAC2Q6ZMT1 411 aa17■□□□□ 0.31
SPPL3-208ENST00000543854 NUFIP2Q7Z417 695 aaKnown RBP17■□□□□ 0.31
SPPL3-208ENST00000543854 NFKBIDQ8NI38 313 aa17■□□□□ 0.31
SPPL3-208ENST00000543854 ZC3HAV1LQ96H79 300 aaKnown RBP17■□□□□ 0.31
SPPL3-208ENST00000543854 ARL5BQ96KC2 179 aa17■□□□□ 0.31
SPPL3-208ENST00000543854 SPATA9Q9BWV2 254 aa17■□□□□ 0.31
SPPL3-208ENST00000543854 TMEM120AQ9BXJ8 343 aa17■□□□□ 0.31
SPPL3-208ENST00000543854 EMC3Q9P0I2 261 aa17■□□□□ 0.31
SPPL3-208ENST00000543854 C6orf203Q9P0P8 240 aaPredicted RBP17■□□□□ 0.31
SPPL3-208ENST00000543854 NDUFAF1Q9Y375 327 aa17■□□□□ 0.31
SPPL3-208ENST00000543854 ZNF208O43345 1280 aa16.99■□□□□ 0.31
SPPL3-208ENST00000543854 PGM3O95394 542 aa16.99■□□□□ 0.31
SPPL3-208ENST00000543854 ARAFP10398 606 aa16.99■□□□□ 0.31
SPPL3-208ENST00000543854 ETS2P15036 469 aa16.99■□□□□ 0.31
SPPL3-208ENST00000543854 CD1EP15812 388 aa16.99■□□□□ 0.31
SPPL3-208ENST00000543854 CRYGSP22914 178 aa16.99■□□□□ 0.31
SPPL3-208ENST00000543854 ANKRD34AQ69YU3 496 aa16.99■□□□□ 0.31
SPPL3-208ENST00000543854 WBP2NLQ6ICG8 309 aa16.99■□□□□ 0.31
SPPL3-208ENST00000543854 PAMR1Q6UXH9 720 aa16.99■□□□□ 0.31
SPPL3-208ENST00000543854 DHDDSQ86SQ9 333 aa16.99■□□□□ 0.31
SPPL3-208ENST00000543854 MTDHQ86UE4 582 aaKnown RBP16.99■□□□□ 0.31
SPPL3-208ENST00000543854 KRT73Q86Y46 540 aa16.99■□□□□ 0.31
SPPL3-208ENST00000543854 CADM2Q8N3J6 435 aa16.99■□□□□ 0.31
SPPL3-208ENST00000543854 DNAJA3Q96EY1 480 aa16.99■□□□□ 0.31
SPPL3-208ENST00000543854 CPPED1Q9BRF8 314 aaPredicted RBP16.99■□□□□ 0.31
SPPL3-208ENST00000543854 IKZF5Q9H5V7 419 aa16.99■□□□□ 0.31
SPPL3-208ENST00000543854 FGFR1OP2Q9NVK5 253 aa16.99■□□□□ 0.31
SPPL3-208ENST00000543854 ING1Q9UK53 422 aaPredicted RBP16.99■□□□□ 0.31
SPPL3-208ENST00000543854 PRDM4Q9UKN5 801 aa16.99■□□□□ 0.31
SPPL3-208ENST00000543854 TMEM72A0PK05 275 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 ZNF724A8MTY0 619 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 PSMB1P20618 241 aaKnown RBP16.98■□□□□ 0.31
SPPL3-208ENST00000543854 DNASE1P24855 282 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 OR2B6P58173 313 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 CDK6Q00534 326 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 REEP3Q6NUK4 255 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 SERPINA11Q86U17 422 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 C10orf111Q8N326 155 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 CLIP4Q8N3C7 705 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 PIGXQ8TBF5 258 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 TSPEARQ8WU66 669 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 ZNF300Q96RE9 604 aaPredicted RBP16.98■□□□□ 0.31
SPPL3-208ENST00000543854 SPATA5L1Q9BVQ7 753 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 ACTR6Q9GZN1 396 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 OR10A4Q9H209 315 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 LIME1Q9H400 295 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 TMEM38AQ9H6F2 299 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 MED4Q9NPJ6 270 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 MRGBPQ9NV56 204 aa16.98■□□□□ 0.31
SPPL3-208ENST00000543854 TMEM181Q9P2C4 612 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms