RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 A6NIZ1 184 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 FGF19O95750 216 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 C8GP07360 202 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 FBLP22087 321 aaKnown RBP8.27□□□□□ -1.09
VPS13D-212ENST00000543766 MAGEA3P43357 314 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 ARL4DP49703 201 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 RAB1AP62820 205 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 FAM3AP98173 230 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 PCLAFQ15004 111 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 COL28A1Q2UY09 1125 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 ELFN2Q5R3F8 820 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 C8orf82Q6P1X6 216 aaPredicted RBP8.27□□□□□ -1.09
VPS13D-212ENST00000543766 ZCCHC23Q6ZST2 131 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 SLC22A15Q8IZD6 547 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 UXS1Q8NBZ7 420 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 ATP6V1C2Q8NEY4 427 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 SLC2A12Q8TD20 617 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 TMEM203Q969S6 136 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 ADI1Q9BV57 179 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 C1orf43Q9BWL3 253 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 UGT2B28Q9BY64 529 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 ALG9Q9H6U8 611 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 SLC17A6Q9P2U8 582 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 PCYT1BQ9Y5K3 369 aaPredicted RBP8.27□□□□□ -1.09
VPS13D-212ENST00000543766 TRBC2A0A5B9 178 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 CXorf49A8MYA2 514 aaPredicted RBP8.26□□□□□ -1.09
VPS13D-212ENST00000543766 RAB29O14966 203 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 APOBEC3AP31941 199 aaPredicted RBP8.26□□□□□ -1.09
VPS13D-212ENST00000543766 CEACAM6P40199 344 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 EVX1P49640 407 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 AKR1C2P52895 323 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 AKR1C1Q04828 323 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 ZNF543Q08ER8 600 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 TPRG1LQ5T0D9 272 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 CMTM1Q8IZ96 169 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 SVBPQ8N300 66 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 PHF10Q8WUB8 498 aaKnown RBP8.26□□□□□ -1.09
VPS13D-212ENST00000543766 ASB17Q8WXJ9 295 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 ST6GALNAC6Q969X2 333 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 UBL7Q96S82 380 aaPredicted RBP8.26□□□□□ -1.09
VPS13D-212ENST00000543766 ARHGDIGQ99819 225 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 TMUB1Q9BVT8 246 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 LHPPQ9H008 270 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 MEGF9Q9H1U4 602 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 NPDC1Q9NQX5 325 aaPredicted RBP8.26□□□□□ -1.09
VPS13D-212ENST00000543766 APOBEC3BQ9UH17 382 aaKnown RBP8.26□□□□□ -1.09
VPS13D-212ENST00000543766 SERTAD3Q9UJW9 196 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 OR10H1Q9Y4A9 318 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 OR2F2O95006 317 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 CELF2O95319 508 aaKnown RBP8.26□□□□□ -1.09
VPS13D-212ENST00000543766 PGAM1P18669 254 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 AOAHP28039 575 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 PSMB9P28065 219 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 HTR5AP47898 357 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 TDGF1P3P51864 188 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 BIDP55957 195 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 GPR19Q15760 415 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 COX19Q49B96 90 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 FAM45BPQ6NSW5 357 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 PODNL1Q6PEZ8 512 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 FBXO39Q8N4B4 442 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 OR5B17Q8NGF7 314 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 SLC7A13Q8TCU3 470 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 RTN4RQ9BZR6 473 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 KLHL28Q9NXS3 571 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 IKZF3Q9UKT9 509 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 RASD1Q9Y272 281 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 CCL27Q9Y4X3 112 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 KCTD3Q9Y597 815 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 AUP1Q9Y679 476 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 C3orf70A6NLC5 250 aaPredicted RBP8.26□□□□□ -1.09
VPS13D-212ENST00000543766 ZNF726A6NNF4 738 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 MCIDASD6RGH6 385 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 SLC33A1O00400 549 aaPredicted RBP8.26□□□□□ -1.09
VPS13D-212ENST00000543766 KIAA0513O60268 411 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 SPRP35270 261 aaPredicted RBP8.26□□□□□ -1.09
VPS13D-212ENST00000543766 AVPR1AP37288 418 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 RAB28P51157 221 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 LSM6P62312 80 aaKnown RBP8.26□□□□□ -1.09
VPS13D-212ENST00000543766 UBXN2BQ14CS0 331 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 ANKRD55Q3KP44 614 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 ESPNLQ6ZVH7 1005 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 SLC16A9Q7RTY1 509 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 RHBDD1Q8TEB9 315 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 TRMT61AQ96FX7 289 aaKnown RBP8.26□□□□□ -1.09
VPS13D-212ENST00000543766 PLEKHM1Q9Y4G2 1056 aa8.26□□□□□ -1.09
VPS13D-212ENST00000543766 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.25□□□□□ -1.09
VPS13D-212ENST00000543766 GJE1A6NN92 205 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 AP4M1O00189 453 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 SERPINE1P05121 402 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 JUNP05412 331 aaKnown RBP8.25□□□□□ -1.09
VPS13D-212ENST00000543766 PMCHP20382 165 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 PRDX5P30044 214 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 MAGEA12P43365 314 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 NUDT2P50583 147 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 EEFSECP57772 596 aaKnown RBP8.25□□□□□ -1.09
VPS13D-212ENST00000543766 FOXL2P58012 376 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 GAB1Q13480 694 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 RBM39Q14498 530 aaKnown RBP8.25□□□□□ -1.09
VPS13D-212ENST00000543766 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms