RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-223	ENST00000543658	KPNA4	O00629	521 aa	Predicted RBP	10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	FFAR1	O14842	300 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	ZNF208	O43345	1280 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	OR10H3	O60404	316 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	ZIC3	O60481	467 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	PRSS23	O95084	383 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	AHSA1	O95433	338 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	PEPD	P12955	493 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	ANPEP	P15144	967 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	PTN	P21246	168 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	CHM	P24386	653 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	MST1	P26927	711 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	SFTPD	P35247	375 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	DLX5	P56178	289 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	IQCC	Q4KMZ1	466 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	SYT14P1	Q58G82	188 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	TSEN54	Q7Z6J9	526 aa	Known RBP	10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	HIPK1	Q86Z02	1210 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	NKAIN4	Q8IVV8	208 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	SVOPL	Q8N434	492 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	C10orf53	Q8N6V4	93 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	OR5K1	Q8NHB7	308 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	NEIL3	Q8TAT5	605 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	PIGX	Q8TBF5	258 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	POC1B	Q8TC44	478 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	STK35	Q8TDR2	534 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	TMEM255B	Q8WV15	326 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	ACOT11	Q8WXI4	607 aa	Predicted RBP	10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	ABTB1	Q969K4	478 aa	Predicted RBP	10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	DHRS1	Q96LJ7	313 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	TAAR6	Q96RI8	345 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	PKP2	Q99959	881 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	TMEM43	Q9BTV4	400 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	TAPBPL	Q9BX59	468 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	TMEM185B	Q9H7F4	350 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	STX18	Q9P2W9	335 aa	Known RBP	10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	TMEM5	Q9Y2B1	443 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	SLC6A5	Q9Y345	797 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	AP4B1	Q9Y6B7	739 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	LOC400499	M0QZD8	3231 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	CFAP47	Q6ZTR5	3102 aa		10.75	□□□□□ -0.69
DDB1-223	ENST00000543658	TRBV4-1	A0A0J9YWV2	114 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	TTLL8	A6PVC2	850 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	SEC14L5	O43304	696 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	MGRN1	O60291	552 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	SEMA7A	O75326	666 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	ACTL6A	O96019	429 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	CELA3A	P09093	270 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	UGT2B15	P54855	530 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	RAC1	P63000	192 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	CRYZ	Q08257	329 aa	Known RBP	10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	NFATC3	Q12968	1075 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	PPP1R8	Q12972	351 aa	Known RBP	10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	TAF11	Q15544	211 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	CMPK2	Q5EBM0	449 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	RNFT1	Q5M7Z0	435 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	HMBOX1	Q6NT76	420 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	PODNL1	Q6PEZ8	512 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	TRIL	Q7L0X0	811 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	CHMP1B	Q7LBR1	199 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	TSPYL5	Q86VY4	417 aa	Predicted RBP	10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	ADGRG3	Q86Y34	549 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	ZDHHC13	Q8IUH4	622 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	UBQLNL	Q8IYU4	475 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	RNF113B	Q8IZP6	322 aa	Known RBP	10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	LILRA2	Q8N149	483 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	GHDC	Q8N2G8	530 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	CISD2	Q8N5K1	135 aa	Known RBP	10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	MEIOB	Q8N635	442 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658		Q8NA96	180 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	OR10G2	Q8NGC3	310 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	GIPC3	Q8TF64	312 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	SARAF	Q96BY9	339 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	OR5B2	Q96R09	309 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	NPAS1	Q99742	590 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	SLC19A3	Q9BZV2	496 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	ZNF556	Q9HAH1	456 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	RNPEPL1	Q9HAU8	725 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	MAN2C1	Q9NTJ4	1040 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	PDP1	Q9P0J1	537 aa	Predicted RBP	10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	LIPG	Q9Y5X9	500 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	MGA	Q8IWI9	3026 aa		10.74	□□□□□ -0.69
DDB1-223	ENST00000543658	TRAV36DV7	A0A075B6V5	113 aa		10.73	□□□□□ -0.69
DDB1-223	ENST00000543658	SH3PXD2B	A1X283	911 aa		10.73	□□□□□ -0.69
DDB1-223	ENST00000543658	HTR3E	A5X5Y0	456 aa		10.73	□□□□□ -0.69
DDB1-223	ENST00000543658	SAC3D1	A6NKF1	404 aa		10.73	□□□□□ -0.69
DDB1-223	ENST00000543658	ENO4	A6NNW6	628 aa		10.73	□□□□□ -0.69
DDB1-223	ENST00000543658		G3V2T6	193 aa		10.73	□□□□□ -0.69
DDB1-223	ENST00000543658	EIF1AY	O14602	144 aa	Known RBP	10.73	□□□□□ -0.69
DDB1-223	ENST00000543658	ATXN7	O15265	892 aa	Predicted RBP	10.73	□□□□□ -0.69
DDB1-223	ENST00000543658	OR2T1	O43869	369 aa		10.73	□□□□□ -0.69
DDB1-223	ENST00000543658	NTN1	O95631	604 aa		10.73	□□□□□ -0.69
DDB1-223	ENST00000543658	ATP6V1G2	O95670	118 aa		10.73	□□□□□ -0.69
DDB1-223	ENST00000543658	IGHG3	P01860	377 aa		10.73	□□□□□ -0.69
DDB1-223	ENST00000543658	THY1	P04216	161 aa		10.73	□□□□□ -0.69
DDB1-223	ENST00000543658	IFI30	P13284	250 aa		10.73	□□□□□ -0.69
DDB1-223	ENST00000543658	IDUA	P35475	653 aa		10.73	□□□□□ -0.69
DDB1-223	ENST00000543658	CLK1	P49759	484 aa	Known RBP	10.73	□□□□□ -0.69
DDB1-223	ENST00000543658	GFRA1	P56159	465 aa		10.73	□□□□□ -0.69
DDB1-223	ENST00000543658	NUP107	P57740	925 aa		10.73	□□□□□ -0.69

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