RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 OR4K17Q8NGC6 315 aa18.07■□□□□ 0.48
SUDS3-204ENST00000543473 OR14K1Q8NGZ2 314 aa18.07■□□□□ 0.48
SUDS3-204ENST00000543473 TRMT2BQ96GJ1 504 aaKnown RBP18.07■□□□□ 0.48
SUDS3-204ENST00000543473 GAAP10253 952 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 CEBPBP17676 345 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 PGCP20142 388 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 TMEM225Q6GV28 225 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 C1orf94Q6P1W5 598 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 SLC51BQ86UW2 128 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 MFSD4AQ8N468 514 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 CHTF18Q8WVB6 975 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 FOXJ1Q92949 421 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 PITX2Q99697 317 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 PITHD1Q9GZP4 211 aaPredicted RBP18.06■□□□□ 0.48
SUDS3-204ENST00000543473 SRRQ9GZT4 340 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 NRIP3Q9NQ35 241 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 ZNF226Q9NYT6 803 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 XIRP1Q702N8 1843 aaKnown RBP18.06■□□□□ 0.48
SUDS3-204ENST00000543473 KCNK2O95069 426 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 ELK1P19419 428 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 PFN3P60673 137 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 HSD11B2P80365 405 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 DCST2Q5T1A1 773 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 BPIFB2Q8N4F0 458 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 FAM26EQ8N5C1 309 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 ACBD4Q8NC06 268 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 ZNF680Q8NEM1 530 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 SEC22CQ9BRL7 303 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 A4GALTQ9NPC4 353 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 SDHAF2Q9NX18 166 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 ATXN7L1Q9ULK2 861 aaPredicted RBP18.06■□□□□ 0.48
SUDS3-204ENST00000543473 HCFC2Q9Y5Z7 792 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 UBR3Q6ZT12 1888 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 MN1Q10571 1320 aaPredicted RBP18.06■□□□□ 0.48
SUDS3-204ENST00000543473 CDHR4A6H8M9 788 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 RAD51DO75771 328 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 M6PRP20645 277 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 TRIM23P36406 574 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 CCR9P51686 369 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 ERVFC1P60507 584 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 PDE7AQ13946 482 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 IDO2Q6ZQW0 420 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 DCLRE1CQ96SD1 692 aaKnown RBP18.06■□□□□ 0.48
SUDS3-204ENST00000543473 TMEFF2Q9UIK5 374 aaPredicted RBP18.06■□□□□ 0.48
SUDS3-204ENST00000543473 NPFFR2Q9Y5X5 522 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 KNL1Q8NG31 2342 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 TMEM82A0PJX8 343 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 HMGB3O15347 200 aaKnown RBP18.06■□□□□ 0.48
SUDS3-204ENST00000543473 CLUP10909 449 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 EN2P19622 333 aaPredicted RBP18.06■□□□□ 0.48
SUDS3-204ENST00000543473 SLC2A5P22732 501 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 ZC3H14Q6PJT7 736 aaKnown RBP18.06■□□□□ 0.48
SUDS3-204ENST00000543473 FIGLAQ6QHK4 219 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 DPPA4Q7L190 304 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 CCDC190Q86UF4 302 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 KATNB1Q9BVA0 655 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 BTBD2Q9BX70 525 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 IL21RQ9HBE5 538 aa18.06■□□□□ 0.48
SUDS3-204ENST00000543473 LSM5Q9Y4Y9 91 aaKnown RBP18.06■□□□□ 0.48
SUDS3-204ENST00000543473 IFNA5P01569 189 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 PSMB5P28074 263 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 CSNK2A1P68400 391 aaPredicted RBP18.05■□□□□ 0.48
SUDS3-204ENST00000543473 C14orf28Q4W4Y0 310 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 SLC16A12Q6ZSM3 486 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 CSNK2A3Q8NEV1 391 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 PXT1Q8NFP0 134 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 PHOSPHO2Q8TCD6 241 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 C16orf58Q96GQ5 468 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 NUP205Q92621 2012 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 TCRBV21S2A2A0A5A6 115 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 ATP1B1P05026 303 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 IGFBP1P08833 259 aaPredicted RBP18.05■□□□□ 0.48
SUDS3-204ENST00000543473 PRSS36Q5K4E3 855 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 FAM219BQ5XKK7 198 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 RBM45Q8IUH3 476 aaKnown RBP18.05■□□□□ 0.48
SUDS3-204ENST00000543473 SIDT1Q9NXL6 827 aaKnown RBP18.05■□□□□ 0.48
SUDS3-204ENST00000543473 NME7Q9Y5B8 376 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 EVPLQ92817 2033 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 HIDE1A8MVS5 230 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 P2RX6O15547 441 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 NUDT1P36639 197 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 OPRD1P41143 372 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 GALK2Q01415 458 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 CCINQ13939 588 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 AADACL4Q5VUY2 407 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 HTR3DQ70Z44 454 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 KLHDC7BQ96G42 594 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 CYP8B1Q9UNU6 501 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 SCO1O75880 301 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 SNRNP70P08621 437 aaKnown RBP18.05■□□□□ 0.48
SUDS3-204ENST00000543473 TIMP2P16035 220 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 BDKRB2P30411 391 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 ZNF41P51814 821 aaPredicted RBP18.05■□□□□ 0.48
SUDS3-204ENST00000543473 GPR50Q13585 617 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 CST6Q15828 149 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 CLVS2Q5SYC1 327 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 MBOAT2Q6ZWT7 520 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 SCARB1Q8WTV0 552 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 ST8SIA4Q92187 359 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 DTD2Q96FN9 168 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms