RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 WDR60Q8WVS4 1066 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CNOT9Q92600 299 aaKnown RBP8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SPDL1Q96EA4 605 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 WFIKKN1Q96NZ8 548 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SRXN1Q9BYN0 137 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 QRSL1Q9H0R6 528 aaKnown RBP8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 GP6Q9HCN6 339 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 FANCFQ9NPI8 374 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 P2RX2Q9UBL9 471 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ZNF232Q9UNY5 417 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SPIN1Q9Y657 262 aaPredicted RBP8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CELSR1Q9NYQ6 3014 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 A0A0G2JPF8 293 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 A0A1W2PNR3 127 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CLDN24A6NM45 220 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 HNRNPCL2B2RXH8 293 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 HNRNPCL3B7ZW38 293 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 HNRNPCL1O60812 293 aaKnown RBP8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 YES1P07947 543 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 HNRNPCL4P0DMR1 293 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 RPS4Y1P22090 263 aaKnown RBP8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ENPP1P22413 925 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 UGT2B10P36537 528 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 HTR3AP46098 478 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 IDH2P48735 452 aaKnown RBP8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CRISP3P54108 245 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CSNK2A1P68400 391 aaPredicted RBP8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SQLEQ14534 574 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 RGNQ15493 299 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ZNF239Q16600 458 aaKnown RBP8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 EXOC3L2Q2M3D2 409 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 GTDC1Q4AE62 458 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TMEM201Q5SNT2 666 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 C3orf33Q6P1S2 294 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TMPPEQ6ZT21 453 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 BEND4Q6ZU67 534 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 GRINAQ7Z429 371 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 STK32CQ86UX6 486 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ADGRG3Q86Y34 549 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TUSC5Q8IXB3 177 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ZNF440Q8IYI8 595 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ANKS4BQ8N8V4 417 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 OR52P1PQ8NH57 321 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 RNF128Q8TEB7 428 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SLC25A43Q8WUT9 341 aaPredicted RBP8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 C10orf82Q8WW14 230 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 STON2Q8WXE9 905 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 NRGNQ92686 78 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 THOC1Q96FV9 657 aaKnown RBP8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 AURKBQ96GD4 344 aaPredicted RBP8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 OR5B2Q96R09 309 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CCDC106Q9BWC9 280 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 KLHL4Q9C0H6 718 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 COQ10BQ9H8M1 238 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SLC52A3Q9NQ40 469 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CTPS2Q9NRF8 586 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ZNF226Q9NYT6 803 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CCDC167Q9P0B6 97 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 DCTN4Q9UJW0 460 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ARL2BPQ9Y2Y0 163 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TESMINQ9Y4I5 508 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TEP1Q99973 2627 aaKnown RBP8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 HIVEP1P15822 2718 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ARID1AO14497 2285 aa8.68□□□□□ -1.02
TNFRSF1A-214ENST00000543048 A0A0G2JND7 137 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 A0A1W2PP18 115 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CFAP73A6NFT4 308 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SULT2B1O00204 365 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 NR5A2O00482 541 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 FAAHO00519 579 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CYTIPO60759 359 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TFPIP10646 304 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 UQCRBP14927 111 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PPP3CBP16298 524 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 NCF2P19878 526 aaPredicted RBP8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PPIBP23284 216 aaKnown RBP8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 AGTR1P30556 359 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SLC1A3P43003 542 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 DIO1P49895 249 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 RASGEF1BQ0VAM2 473 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 FADDQ13158 208 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 LARS2Q15031 903 aaKnown RBP8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SYT14P1Q58G82 188 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 LRIF1Q5T3J3 769 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 MRPL2Q5T653 305 aaKnown RBP8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PRAMEF8Q5VWM4 474 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PRAMEF7Q5VXH5 474 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 MTDHQ86UE4 582 aaKnown RBP8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 VRK2Q86Y07 508 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ABHD3Q8WU67 409 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 NINJ1Q92982 152 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TACO1Q9BSH4 297 aaKnown RBP8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 MED18Q9BUE0 208 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TMEM120AQ9BXJ8 343 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 HDHD5Q9BXW7 423 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ADAM19Q9H013 955 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ARMC7Q9H6L4 198 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 C12orf49Q9H741 205 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CACYBPQ9HB71 228 aaKnown RBP8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 BCL2L10Q9HD36 194 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms