RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 ILF2Q12905 390 aaKnown RBP7.33□□□□□ -1.24
MRPS35-204ENST00000542199 PDIA2Q13087 525 aaKnown RBP7.33□□□□□ -1.24
MRPS35-204ENST00000542199 TSNQ15631 228 aaKnown RBP7.33□□□□□ -1.24
MRPS35-204ENST00000542199 ABHD13Q7L211 337 aa7.33□□□□□ -1.24
MRPS35-204ENST00000542199 ADAMTSL2Q86TH1 951 aa7.33□□□□□ -1.24
MRPS35-204ENST00000542199 MCEMP1Q8IX19 187 aa7.33□□□□□ -1.24
MRPS35-204ENST00000542199 RNF113BQ8IZP6 322 aaKnown RBP7.33□□□□□ -1.24
MRPS35-204ENST00000542199 SLC5A8Q8N695 610 aa7.33□□□□□ -1.24
MRPS35-204ENST00000542199 TRPV3Q8NET8 790 aa7.33□□□□□ -1.24
MRPS35-204ENST00000542199 THAP6Q8TBB0 222 aa7.33□□□□□ -1.24
MRPS35-204ENST00000542199 FIG4Q92562 907 aa7.33□□□□□ -1.24
MRPS35-204ENST00000542199 ZNF354BQ96LW1 612 aa7.33□□□□□ -1.24
MRPS35-204ENST00000542199 LPAR4Q99677 370 aa7.33□□□□□ -1.24
MRPS35-204ENST00000542199 AIF1LQ9BQI0 150 aa7.33□□□□□ -1.24
MRPS35-204ENST00000542199 PPIL3Q9H2H8 161 aaKnown RBP7.33□□□□□ -1.24
MRPS35-204ENST00000542199 RHOJQ9H4E5 214 aa7.33□□□□□ -1.24
MRPS35-204ENST00000542199 KCNK13Q9HB14 408 aa7.33□□□□□ -1.24
MRPS35-204ENST00000542199 POPDC3Q9HBV1 291 aa7.33□□□□□ -1.24
MRPS35-204ENST00000542199 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.33□□□□□ -1.24
MRPS35-204ENST00000542199 RNF14Q9UBS8 474 aa7.33□□□□□ -1.24
MRPS35-204ENST00000542199 SLC22A14Q9Y267 594 aa7.33□□□□□ -1.24
MRPS35-204ENST00000542199 VDAC3Q9Y277 283 aa7.33□□□□□ -1.24
MRPS35-204ENST00000542199 SCN3AQ9NY46 2000 aa7.33□□□□□ -1.24
MRPS35-204ENST00000542199 CPAMD8Q8IZJ3 1885 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 CROCCQ5TZA2 2017 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 VPS13CQ709C8 3753 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 URADA6NGE7 173 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 SAGE2PA6NJ88 616 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 NDC80O14777 642 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 B4GALT2O60909 372 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 WISP2O76076 250 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 C1QAP02745 245 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 SERPIND1P05546 499 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 RNH1P13489 461 aaKnown RBP7.32□□□□□ -1.24
MRPS35-204ENST00000542199 GNAZP19086 355 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 ART1P52961 327 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 OR4D2P58180 307 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 CD81P60033 236 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 RAB8AP61006 207 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 PMP22Q01453 160 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 ACTN3Q08043 901 aaPredicted RBP7.32□□□□□ -1.24
MRPS35-204ENST00000542199 KEAP1Q14145 624 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 OR1C1Q15619 314 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 CYS1Q717R9 158 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 Q75L30 129 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 TMPRSS11BQ86T26 416 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 SIAH3Q8IW03 269 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 ZBED8Q8IZ13 594 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 SLC34A3Q8N130 599 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 C9orf106Q8NAJ2 232 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 TTLQ8NG68 377 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 VPS39Q96JC1 886 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 SIGLEC12Q96PQ1 595 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 KRT12Q99456 494 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 UTP23Q9BRU9 249 aaKnown RBP7.32□□□□□ -1.24
MRPS35-204ENST00000542199 HES7Q9BYE0 225 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 RTN4RQ9BZR6 473 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 DERL2Q9GZP9 239 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 TRIM45Q9H8W5 580 aaPredicted RBP7.32□□□□□ -1.24
MRPS35-204ENST00000542199 SEC14L3Q9UDX4 400 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 PYCARDQ9ULZ3 195 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 ENTPD4Q9Y227 616 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 SNX24Q9Y343 169 aa7.32□□□□□ -1.24
MRPS35-204ENST00000542199 NIPBLQ6KC79 2804 aaeCLIP7.31□□□□□ -1.24
MRPS35-204ENST00000542199 TRGV8A0A0C4DH27 118 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 SYNDIG1LA6NDD5 238 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 GABRR3A8MPY1 467 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 LDB3O75112 727 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 PIAS1O75925 651 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 ZWINTO95229 277 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 TBX6O95947 436 aaPredicted RBP7.31□□□□□ -1.24
MRPS35-204ENST00000542199 C1GALT1C1LP0DN25 315 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 IL11P20809 199 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 HNF4AP41235 474 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 CA7P43166 264 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 BTG2P78543 158 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 MRPS25P82663 173 aaKnown RBP7.31□□□□□ -1.24
MRPS35-204ENST00000542199 ART3Q13508 389 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 RBBP5Q15291 538 aaKnown RBP7.31□□□□□ -1.24
MRPS35-204ENST00000542199 TGFBIQ15582 683 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 ZKSCAN8Q15776 578 aaPredicted RBP7.31□□□□□ -1.24
MRPS35-204ENST00000542199 C18orf21Q32NC0 220 aaPredicted RBP7.31□□□□□ -1.24
MRPS35-204ENST00000542199 ADPRMQ3LIE5 342 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 FAM98BQ52LJ0 330 aaKnown RBP7.31□□□□□ -1.24
MRPS35-204ENST00000542199 CDKL4Q5MAI5 379 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 SPINK14Q6IE38 97 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 TMIGD1Q6UXZ0 262 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 FRA10AC1Q70Z53 315 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 RPS19BP1Q86WX3 136 aaKnown RBP7.31□□□□□ -1.24
MRPS35-204ENST00000542199 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.31□□□□□ -1.24
MRPS35-204ENST00000542199 CA13Q8N1Q1 262 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 KIF2BQ8N4N8 673 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 TMEM178AQ8NBL3 297 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 APCDD1LQ8NCL9 501 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 BBOF1Q8ND07 529 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 NFAM1Q8NET5 270 aaPredicted RBP7.31□□□□□ -1.24
MRPS35-204ENST00000542199 PYROXD1Q8WU10 500 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 ITLN2Q8WWU7 325 aaPredicted RBP7.31□□□□□ -1.24
MRPS35-204ENST00000542199 DACH2Q96NX9 599 aa7.31□□□□□ -1.24
MRPS35-204ENST00000542199 CDRT15Q96T59 188 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms