RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 FAM107AO95990 144 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 CD8BP10966 210 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 GRNP28799 593 aaKnown RBP12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 SHC1P29353 583 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 TACR3P29371 465 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 KIR2DL2P43627 348 aaPredicted RBP12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 AGFG1P52594 562 aaKnown RBP12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 FOXF2Q12947 444 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 ZNF239Q16600 458 aaKnown RBP12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 C8orf82Q6P1X6 216 aaPredicted RBP12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 FAM214BQ7L5A3 538 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 KIF18BQ86Y91 864 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 TREML1Q86YW5 311 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 RELL2Q8NC24 303 aaPredicted RBP12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 RNF128Q8TEB7 428 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 RNASE6Q93091 150 aaKnown RBP12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 DDIT4LQ96D03 193 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 RCN3Q96D15 328 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 STARD4Q96DR4 205 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 LRRC37BQ96QE4 947 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 CCT8L2Q96SF2 557 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 SLC39A3Q9BRY0 314 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 RSPO3Q9BXY4 272 aaPredicted RBP12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 POTEKPQ9BYX7 375 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 PRRG4Q9BZD6 226 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 TRIM2Q9C040 744 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 TMEM185BQ9H7F4 350 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 PLSCR4Q9NRQ2 329 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 HCFC1P51610 2035 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 CACNA1CQ13936 2221 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 MED12LQ86YW9 2145 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 KIAA1549Q9HCM3 1950 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 SETXQ7Z333 2677 aaKnown RBP12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 TMED7-TICAM2A0A0A6YYA0 188 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 NKX2-6A6NCS4 301 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 A8MXE2 369 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 SULT2B1O00204 365 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 SS18L1O75177 396 aaPredicted RBP12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 PRKD3O94806 890 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 LGI1O95970 557 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 CGAP01215 116 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 IFNA14P01570 189 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 GKN3PP0CG01 181 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 PRG2P13727 222 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 CXCR1P25024 350 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 KCNJ5P48544 419 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 DIO1P49895 249 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 PDK3Q15120 406 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 C6orf89Q6UWU4 347 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 DMRTC2Q8IXT2 367 aaPredicted RBP12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 POU5F2Q8N7G0 328 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 DNAJA4Q8WW22 397 aaPredicted RBP12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 OR5B2Q96R09 309 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 ZNF559Q9BR84 538 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 TRIM8Q9BZR9 551 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 COQ10BQ9H8M1 238 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 NPDC1Q9NQX5 325 aaPredicted RBP12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 TESQ9UGI8 421 aaKnown RBP12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 SLC13A4Q9UKG4 626 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 ADAM21Q9UKJ8 722 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 TMED7Q9Y3B3 224 aa12.32□□□□□ -0.44
TNFSF13B-206ENST00000542136 FAM90A27PA6NNH2 459 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 A8MVM7 634 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 FAM220BPB1ANY3 271 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 C19orf84I3L1E1 186 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 AIM2O14862 343 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 TPST1O60507 370 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 EIF1BO60739 113 aaKnown RBP12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 OPN1LWP04000 364 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 COX6B1P14854 86 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 COL8A1P27658 744 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 H3F3AP84243 136 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 SORDQ00796 357 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 DMTNQ08495 405 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 MYBPHQ13203 477 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 DUSP7Q16829 419 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 SWT1Q5T5J6 900 aaKnown RBP12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 GKAP1Q5VSY0 366 aaPredicted RBP12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 C5orf46Q6UWT4 87 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 FCRLAQ7L513 359 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 SLC15A3Q8IY34 581 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 GCNT2Q8N0V5 402 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 OR2T12Q8NG77 320 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 OR6K3Q8NGY3 331 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 ZHX1-C8orf76Q96EF9 292 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 ELOVL5Q9NYP7 299 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 TMEM181Q9P2C4 612 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 EMC9Q9Y3B6 208 aa12.31□□□□□ -0.44
TNFSF13B-206ENST00000542136 ZNF724A8MTY0 619 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 CYTIPO60759 359 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 NPIPB7O75200 414 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 PLGP00747 810 aaPredicted RBP12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 YES1P07947 543 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 TFPIP10646 304 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 PNMTP11086 282 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 ENPP1P22413 925 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 AQP1P29972 269 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 MNAT1P51948 309 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 CTBP2P56545 445 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 SLC35A1P78382 337 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms