RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 BIDP55957 195 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 TMEM33P57088 247 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 STXBP1P61764 594 aaKnown RBP4.83□□□□□ -1.64
SNHG1-218ENST00000541615 PJVKQ0ZLH3 352 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 MLLT11Q13015 90 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-218ENST00000541615 TRA2AQ13595 282 aaKnown RBP eCLIP4.83□□□□□ -1.642e-56■■■■□ 20.9
SNHG1-218ENST00000541615 CDH18Q13634 790 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 OR4D1Q15615 310 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 TPSAB1Q15661 275 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 SMIM21Q3B7S5 101 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 PTCHD3Q3KNS1 767 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 EIPR1Q53HC9 387 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 ZNF667Q5HYK9 610 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 CBWD3Q5JTY5 395 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 ELFN2Q5R3F8 820 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 CBWD5Q5RIA9 395 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 GCNT6Q5T4J0 391 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 KHDRBS2Q5VWX1 349 aaKnown RBP4.83□□□□□ -1.64
SNHG1-218ENST00000541615 OR4F3Q6IEY1 312 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 USP17L6PQ6QN14 398 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 USP17L2Q6R6M4 530 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 VHLLQ6RSH7 139 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 LYPD4Q6UWN0 246 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 DRAM2Q6UX65 266 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 LARP4Q71RC2 724 aaKnown RBP eCLIP4.83□□□□□ -1.64
SNHG1-218ENST00000541615 PID1Q7Z2X4 250 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 GOLGA7Q7Z5G4 137 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 GRASPQ7Z6J2 395 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-218ENST00000541615 TMED4Q7Z7H5 227 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 PDZD3Q86UT5 571 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 VASH2Q86V25 355 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 GLB1L2Q8IW92 636 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 MRPL41Q8IXM3 137 aaKnown RBP4.83□□□□□ -1.64
SNHG1-218ENST00000541615 FAM126BQ8IXS8 530 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 CPXM2Q8N436 756 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 BPIFB2Q8N4F0 458 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 TTC9BQ8N6N2 239 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 DNAJC5GQ8N7S2 189 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 TMEM161BQ8NDZ6 487 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 PROKR2Q8NFJ6 384 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 OR4F15Q8NGB8 312 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 OR1J1Q8NGS3 322 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 OR14L1PQ8NHC6 308 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 OR14C36Q8NHC7 312 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 CXorf40AQ8TE69 158 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 C15orf40Q8WUR7 153 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 TMEM234Q8WY98 164 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 CNOT9Q92600 299 aaKnown RBP4.83□□□□□ -1.64
SNHG1-218ENST00000541615 PYCR2Q96C36 320 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 RASD2Q96D21 266 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 DNAJC19Q96DA6 116 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 ZNF419Q96HQ0 510 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-218ENST00000541615 PPP1R16AQ96I34 528 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 TMEM56Q96MV1 263 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 FAM193BQ96PV7 902 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-218ENST00000541615 ALKBH3Q96Q83 286 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-218ENST00000541615 OR4K3Q96R72 315 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 SEPHS2Q99611 448 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 CBWD1Q9BRT8 395 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 ATG101Q9BSB4 218 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 CACNG6Q9BXT2 260 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 GPR87Q9BY21 358 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 HDAC8Q9BY41 377 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 WDR11Q9BZH6 1224 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 ULBP1Q9BZM6 244 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 OR8D2Q9GZM6 311 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 C20orf85Q9H1P6 137 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 PRDM12Q9H4Q4 367 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 CWH43Q9H720 699 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 ACTR8Q9H981 624 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 LPAR2Q9HBW0 351 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 EXOSC4Q9NPD3 245 aaKnown RBP4.83□□□□□ -1.64
SNHG1-218ENST00000541615 IL17RBQ9NRM6 502 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 NDUFB11Q9NX14 153 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 MARCH5Q9NX47 278 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 TMEM260Q9NX78 707 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 CCDC167Q9P0B6 97 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 RCC2Q9P258 522 aaKnown RBP4.83□□□□□ -1.64
SNHG1-218ENST00000541615 LRP2BPQ9P2M1 347 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 COMMD3Q9UBI1 195 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 RPS6KB2Q9UBS0 482 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 EGFL7Q9UHF1 273 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 KCNG2Q9UJ96 466 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 ZNF223Q9UK11 482 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-218ENST00000541615 SLC13A4Q9UKG4 626 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 UTS2RQ9UKP6 389 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 CLEC4EQ9ULY5 219 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 A4GNTQ9UNA3 340 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 TMEM56-RWDD3S4R434 201 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 KIF1BO60333 1816 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 ECM29Q5VYK3 1845 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 TET3O43151 1660 aa4.83□□□□□ -1.64
SNHG1-218ENST00000541615 COL1A2P08123 1366 aa4.82□□□□□ -1.64
SNHG1-218ENST00000541615 FER1L6Q2WGJ9 1857 aa4.82□□□□□ -1.64
SNHG1-218ENST00000541615 A0A087WZY1 265 aa4.82□□□□□ -1.64
SNHG1-218ENST00000541615 NPIPA5A0A0B4J1W7 369 aa4.82□□□□□ -1.64
SNHG1-218ENST00000541615 C2orf78A6NCI8 922 aa4.82□□□□□ -1.64
SNHG1-218ENST00000541615 GGT3PA6NGU5 568 aa4.82□□□□□ -1.64
SNHG1-218ENST00000541615 OR52A4PA6NMU1 304 aa4.82□□□□□ -1.64
SNHG1-218ENST00000541615 ZNF724A8MTY0 619 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms