RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 SLC6A2P23975 617 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 AGTR1P30556 359 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 DIO1P49895 249 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 CTBP2P56545 445 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 PCBP3P57721 371 aaKnown RBP11.7□□□□□ -0.54
LTBR-208ENST00000541005 MTPNP58546 118 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 CSNK2A1P68400 391 aaPredicted RBP11.7□□□□□ -0.54
LTBR-208ENST00000541005 SIRPAP78324 504 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 RBBP4Q09028 425 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 MYBPHQ13203 477 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 SCARB2Q14108 478 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 SELPLGQ14242 412 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 ZNF311Q5JNZ3 666 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 ZNF474Q6S9Z5 364 aaPredicted RBP11.7□□□□□ -0.54
LTBR-208ENST00000541005 TMPPEQ6ZT21 453 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 FCRLAQ7L513 359 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 SERPINA11Q86U17 422 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 KRT73Q86Y46 540 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 PTOV1Q86YD1 416 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 C11orf65Q8NCR3 313 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 HIPK4Q8NE63 616 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 ABHD3Q8WU67 409 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 ROBO4Q8WZ75 1007 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 REXO5Q96IC2 774 aaKnown RBP11.7□□□□□ -0.54
LTBR-208ENST00000541005 OR5B2Q96R09 309 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 TACO1Q9BSH4 297 aaKnown RBP11.7□□□□□ -0.54
LTBR-208ENST00000541005 SPATA5L1Q9BVQ7 753 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 RSPO3Q9BXY4 272 aaPredicted RBP11.7□□□□□ -0.54
LTBR-208ENST00000541005 KAT8Q9H7Z6 458 aaKnown RBP11.7□□□□□ -0.54
LTBR-208ENST00000541005 BCO1Q9HAY6 547 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 PLSCR4Q9NRQ2 329 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 ELOVL5Q9NYP7 299 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 CRIM1Q9NZV1 1036 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 OSGIN1Q9UJX0 560 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 PROCRQ9UNN8 238 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 ANGPT4Q9Y264 503 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 CAPN7Q9Y6W3 813 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 TMED7-TICAM2A0A0A6YYA0 188 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 FAM221AA4D161 298 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 TUBAL3A6NHL2 446 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 SMAD9O15198 467 aaKnown RBP11.69□□□□□ -0.54
LTBR-208ENST00000541005 CYTIPO60759 359 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 SMNDC1O75940 238 aaKnown RBP eCLIP11.69□□□□□ -0.54
LTBR-208ENST00000541005 GOSR1O95249 250 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 GKN3PP0CG01 181 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 ENPP1P22413 925 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 TACR3P29371 465 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 CD79BP40259 229 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 DAZAP2Q15038 168 aaPredicted RBP11.69□□□□□ -0.54
LTBR-208ENST00000541005 CYP51A1Q16850 503 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 ABLIM2Q6H8Q1 611 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 WBP2NLQ6ICG8 309 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 PPP4R4Q6NUP7 873 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 SLC30A8Q8IWU4 369 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 BHLHE22Q8NFJ8 381 aaPredicted RBP11.69□□□□□ -0.54
LTBR-208ENST00000541005 OR8J3Q8NGG0 315 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 LURAP1Q96LR2 239 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 OPN3Q9H1Y3 402 aaPredicted RBP11.69□□□□□ -0.54
LTBR-208ENST00000541005 ING1Q9UK53 422 aaPredicted RBP11.69□□□□□ -0.54
LTBR-208ENST00000541005 TRAPPC4Q9Y296 219 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 TMED7Q9Y3B3 224 aa11.69□□□□□ -0.54
LTBR-208ENST00000541005 CADP27708 2225 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 TMEM72A0PK05 275 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 PRORSD1PA6NEY8 169 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 SULT2B1O00204 365 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 PRKD3O94806 890 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 FESP07332 822 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 EPXP11678 715 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 PRG2P13727 222 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 CCKARP32238 428 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 PCGF2P35227 344 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 CPOXP36551 454 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 GZMMP51124 257 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 COPZ1P61923 177 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 SF3A3Q12874 501 aaKnown RBP eCLIP11.68□□□□□ -0.54
LTBR-208ENST00000541005 SNTB1Q13884 538 aaKnown RBP11.68□□□□□ -0.54
LTBR-208ENST00000541005 CYLC2Q14093 348 aaPredicted RBP11.68□□□□□ -0.54
LTBR-208ENST00000541005 CAPRIN1Q14444 709 aaKnown RBP11.68□□□□□ -0.54
LTBR-208ENST00000541005 PDK3Q15120 406 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 REP15Q6BDI9 236 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 NANOGP8Q6NSW7 305 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 C6orf89Q6UWU4 347 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 MTDHQ86UE4 582 aaKnown RBP11.68□□□□□ -0.54
LTBR-208ENST00000541005 COMTD1Q86VU5 262 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 SNX32Q86XE0 403 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 ZZZ3Q8IYH5 903 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 ZNF610Q8N9Z0 462 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 LRRC58Q96CX6 371 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 ARL5BQ96KC2 179 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 DACH2Q96NX9 599 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 ZNF607Q96SK3 696 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 SH3GL1Q99961 368 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 PSD2Q9BQI7 771 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 SLC39A3Q9BRY0 314 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 OR11A1Q9GZK7 315 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 EVA1AQ9H8M9 152 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 NANOGQ9H9S0 305 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 KLHL9Q9P2J3 617 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 CLEC4AQ9UMR7 237 aa11.68□□□□□ -0.54
LTBR-208ENST00000541005 TESMINQ9Y4I5 508 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms