RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 GPR139Q6DWJ6 353 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 ZCCHC12Q6PEW1 402 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 PRSS45Q7RTY3 260 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 SYT9Q86SS6 491 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 DOK4Q8TEW6 326 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 SERTAD3Q9UJW9 196 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 A0A087WV62 115 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 LOC105371267A0A1B0GV96 52 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 WNT1P04628 370 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 CD1AP06126 327 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 OR2T7P0C7T2 308 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 DRD5P21918 477 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 DNASE1P24855 282 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 SLC6A6P31641 620 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 HCCSP53701 268 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 GAS6Q14393 721 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 CDK5R1Q15078 307 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 ARHGAP11AQ6P4F7 1023 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 ESPNLQ6ZVH7 1005 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 SYS1Q8N2H4 156 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 SLC43A2Q8N370 569 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 RFLNBQ8N5W9 214 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 FAM98AQ8NCA5 519 aaKnown RBP11.33□□□□□ -0.59
NPC1-202ENST00000540608 BEST4Q8NFU0 473 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 OR2T27Q8NH04 317 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 ZCCHC10Q8TBK6 192 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 SMIM4Q8WVI0 70 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 NXPE2Q96DL1 559 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 PELI1Q96FA3 418 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 EMC3Q9P0I2 261 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 USP36Q9P275 1121 aaKnown RBP11.33□□□□□ -0.59
NPC1-202ENST00000540608 RABL2AQ9UBK7 228 aaPredicted RBP11.33□□□□□ -0.59
NPC1-202ENST00000540608 KCNN3Q9UGI6 736 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 RABL2BQ9UNT1 228 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 RWDD3Q9Y3V2 267 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 NPTNQ9Y639 398 aa11.33□□□□□ -0.59
NPC1-202ENST00000540608 A0A0B4J2E0 115 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 A0A1B0GX12 115 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 ANKRD61A6NGH8 418 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 ZNF593O00488 134 aaPredicted RBP11.33□□□□□ -0.6
NPC1-202ENST00000540608 SSNA1O43805 119 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 AK1P00568 194 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 IFNA7P01567 189 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 RPS11P62280 158 aaKnown RBP eCLIP11.33□□□□□ -0.6
NPC1-202ENST00000540608 ACTA2P62736 377 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 ACTG2P63267 376 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 SIRPAP78324 504 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 ID2Q02363 134 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 SNTA1Q13424 505 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 FHL1Q13642 323 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 PSRC1Q6PGN9 363 aaPredicted RBP11.33□□□□□ -0.6
NPC1-202ENST00000540608 FIGNL1Q6PIW4 674 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 GRHL3Q8TE85 626 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 SCARF2Q96GP6 870 aaPredicted RBP11.33□□□□□ -0.6
NPC1-202ENST00000540608 OR2A5Q96R48 311 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 APOOQ9BUR5 198 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 DPCDQ9BVM2 203 aaPredicted RBP11.33□□□□□ -0.6
NPC1-202ENST00000540608 CLEC4MQ9H2X3 399 aaPredicted RBP11.33□□□□□ -0.6
NPC1-202ENST00000540608 NARFLQ9H6Q4 476 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 MCCC2Q9HCC0 563 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 TMEM74BQ9NUR3 256 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 AK6Q9Y3D8 172 aaKnown RBP11.33□□□□□ -0.6
NPC1-202ENST00000540608 PCDHGA9Q9Y5G4 932 aaKnown RBP11.33□□□□□ -0.6
NPC1-202ENST00000540608 SZT2Q5T011 3432 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 SYNDIG1LA6NDD5 238 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 URADA6NGE7 173 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 B8ZZF3 427 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 P2RX6O15547 441 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 ZNF749O43361 778 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 BRINP1O60477 761 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 TFP02787 698 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 ATP1B1P05026 303 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 IGFALSP35858 605 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 GDNFP39905 211 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 MAP3K8P41279 467 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 PLAURQ03405 335 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 RIPPLY1Q0D2K3 151 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 FGFBP1Q14512 234 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 TCEA2Q15560 299 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 UBE2NLQ5JXB2 153 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 RPL22L1Q6P5R6 122 aaKnown RBP11.33□□□□□ -0.6
NPC1-202ENST00000540608 SLITRK4Q8IW52 837 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 PIAS4Q8N2W9 510 aaPredicted RBP11.33□□□□□ -0.6
NPC1-202ENST00000540608 ARL14Q8N4G2 192 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 OR6C4Q8NGE1 309 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 SLC22A18Q96BI1 424 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 SLC17A9Q9BYT1 436 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 PLA2G2FQ9BZM2 168 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 EVA1AQ9H8M9 152 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 NRIP3Q9NQ35 241 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 ICAM5Q9UMF0 924 aa11.33□□□□□ -0.6
NPC1-202ENST00000540608 LRRC72A6NJI9 287 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 GRXCR1A8MXD5 290 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 MAGEB4O15481 346 aaPredicted RBP11.32□□□□□ -0.6
NPC1-202ENST00000540608 TYRP1P17643 537 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 GABRA3P34903 492 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 ZNF81P51508 661 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 GRK1Q15835 563 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 CDONQ4KMG0 1287 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 CLLU1Q5K131 121 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms