RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SYT14P1Q58G82 188 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 INTS6LQ5JSJ4 861 aaKnown RBP10.34□□□□□ -0.75
PBX1-212ENST00000540236 FAHD1Q6P587 224 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 CERS6Q6ZMG9 384 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 SMOQ99835 787 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 OARD1Q9Y530 152 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 UMAD1C9J7I0 102 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 TAPBPO15533 448 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 PRKRAO75569 313 aaKnown RBP10.34□□□□□ -0.75
PBX1-212ENST00000540236 NID1P14543 1247 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 ATP5C1P36542 298 aaKnown RBP10.34□□□□□ -0.75
PBX1-212ENST00000540236 RPL29P47914 159 aaKnown RBP10.34□□□□□ -0.75
PBX1-212ENST00000540236 USP53Q70EK8 1073 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 SLC16A9Q7RTY1 509 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 OR13C9Q8NGT0 318 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 SECTM1Q8WVN6 248 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 ELP3Q9H9T3 547 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 SHROOM3Q8TF72 1996 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 UBR2Q8IWV8 1755 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 A0A1W2PPE2 198 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 PPP1R3DO95685 299 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 MMP10P09238 476 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 SBK2P0C263 348 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 ZNF28P17035 718 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 SPI1P17947 270 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 PCGF2P35227 344 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 CCR9P51686 369 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 TMEM99Q8N816 258 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 KDF1Q8NAX2 398 aaPredicted RBP10.34□□□□□ -0.75
PBX1-212ENST00000540236 FATE1Q969F0 183 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 EDEM2Q9BV94 578 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 C1GALT1Q9NS00 363 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 HACL1Q9UJ83 578 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 PCDHGA5Q9Y5G8 931 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 PCDHGA1Q9Y5H4 931 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 TMEM218A2RU14 115 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 MAPK14Q16539 360 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 XKR7Q5GH72 579 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 ZNF467Q7Z7K2 595 aaPredicted RBP10.34□□□□□ -0.75
PBX1-212ENST00000540236 PARGQ86W56 976 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 SELENOIQ9C0D9 397 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 ACTL8Q9H568 366 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 ACER3Q9NUN7 267 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 PRR13Q9NZ81 148 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 QSOX1O00391 747 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 EIF1AYO14602 144 aaKnown RBP10.34□□□□□ -0.75
PBX1-212ENST00000540236 SEMA7AO75326 666 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 MCATQ8IVS2 390 aaKnown RBP10.34□□□□□ -0.75
PBX1-212ENST00000540236 RNF141Q8WVD5 230 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 C19orf43Q9BQ61 176 aa10.34□□□□□ -0.75
PBX1-212ENST00000540236 ARL6IP5O75915 188 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 ADAP00813 363 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 SLC6A1P30531 599 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 ADCYAP1R1P41586 468 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 PABPC1L2AQ5JQF8 200 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 SSX7Q7RTT5 188 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 GPRC5AQ8NFJ5 357 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 CDHR4A6H8M9 788 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 SGK494L7N484 410 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 AP4M1O00189 453 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 TRAPPC6AO75865 159 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 KNG1P01042 644 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 FGBP02675 491 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 LGALS2P05162 132 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 ELAVL4P26378 380 aaKnown RBP10.33□□□□□ -0.76
PBX1-212ENST00000540236 ADRA1AP35348 466 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 GSK3AP49840 483 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 SNRPNP63162 240 aaKnown RBP10.33□□□□□ -0.76
PBX1-212ENST00000540236 RASGEF1BQ0VAM2 473 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 RAB40BQ12829 278 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 ASPGQ86U10 573 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 ACBD7Q8N6N7 88 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 L3MBTL4Q8NA19 623 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 PNLDC1Q8NA58 520 aaKnown RBP10.33□□□□□ -0.76
PBX1-212ENST00000540236 RSC1A1Q92681 617 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 ULBP3Q9BZM4 244 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 SIRT7Q9NRC8 400 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 SEC14L5O43304 696 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 RHOP08100 348 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 HOXB5P09067 269 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 AKAIN1P0CW23 69 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 IDH3GP51553 393 aaPredicted RBP10.33□□□□□ -0.76
PBX1-212ENST00000540236 ZNF140P52738 457 aaPredicted RBP10.33□□□□□ -0.76
PBX1-212ENST00000540236 HBA1P69905 142 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 IL13RA1P78552 427 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 LASP1Q14847 261 aaKnown RBP10.33□□□□□ -0.76
PBX1-212ENST00000540236 OTPQ5XKR4 325 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 HORMAD2Q8N7B1 307 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 OR4K13Q8NH42 304 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 FRZBQ92765 325 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 ZNF354BQ96LW1 612 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 EPHA6Q9UF33 1036 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 BACE2Q9Y5Z0 518 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 TRAV27A0A087WT01 109 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 ANKUB1A6NFN9 424 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 RNASEK-C17orf49H0YIS7 233 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 ACOT7O00154 380 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 PCBP4P57723 403 aaKnown RBP10.33□□□□□ -0.76
PBX1-212ENST00000540236 ST8SIA6P61647 398 aa10.33□□□□□ -0.76
PBX1-212ENST00000540236 MPPE1Q53F39 396 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms