RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 TACR3P29371 465 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 KDELR2P33947 212 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 SFTPDP35247 375 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 APOBEC1P41238 236 aaKnown RBP6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 HTR3AP46098 478 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 POLR2HP52434 150 aaKnown RBP6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 PER3P56645 1201 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 NUP107P57740 925 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 RGS8P57771 180 aaPredicted RBP6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 HOXC5Q00444 222 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 GUCA2AQ02747 115 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 SF3B4Q15427 424 aaKnown RBP eCLIP6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 NPTX1Q15818 432 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 CYBRD1Q53TN4 286 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 SYT14P1Q58G82 188 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 SAMD4BQ5PRF9 694 aaKnown RBP6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 NSUN5P2Q63ZY6 315 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 WBP2NLQ6ICG8 309 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 MTFR2Q6P444 385 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 POMZP3Q6PJE2 187 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 PLXDC2Q6UX71 529 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 RINLQ6ZS11 566 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 ESPNLQ6ZVH7 1005 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 SEM1Q6ZVN7 128 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 LACC1Q8IV20 430 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 DEFB107AQ8IZN7 70 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 LILRA2Q8N149 483 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 RNF148Q8N7C7 305 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 LSMEM1Q8N8F7 131 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 FAM156AQ8NDB6 213 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 TNIP2Q8NFZ5 429 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 OR4D11Q8NGI4 311 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 OR10D3Q8NH80 312 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 MBD3L2Q8NHZ7 208 aaPredicted RBP6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 SLC26A7Q8TE54 656 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 SSC4DQ8WTU2 575 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 SLC25A43Q8WUT9 341 aaPredicted RBP6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 FIG4Q92562 907 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 C3orf49Q96BT1 292 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 ZNF845Q96IR2 970 aaPredicted RBP6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 KLHL15Q96M94 604 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 TRIB1Q96RU8 372 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 CDRT15Q96T59 188 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 ADAM19Q9H013 955 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 C1orf21Q9H246 121 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 KLHL28Q9NXS3 571 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 ALKBH4Q9NXW9 302 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 ADA2Q9NZK5 511 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 STOML1Q9UBI4 398 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 CD300AQ9UGN4 299 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 OSGIN1Q9UJX0 560 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 PACSIN3Q9UKS6 424 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 CACNA1CQ13936 2221 aa6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 DIDO1Q9BTC0 2240 aaKnown RBP6.27□□□□□ -1.41
LPCAT3-209ENST00000540060 MYO7BQ6PIF6 2116 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 INTS1Q8N201 2190 aaKnown RBP6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 TMED7-TICAM2A0A0A6YYA0 188 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 A0A0B4J2E0 115 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 A0A0G2JNJ9 132 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 A0A1B0GWA3 101 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 A0A1B0GX12 115 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 TMEM72A0PK05 275 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 SLC22A20A6NK97 555 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 GJE1A6NN92 205 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 GSTA4O15217 222 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 ZNF208O43345 1280 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 FMO6PO60774 539 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 TOXO94900 526 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 IFNA14P01570 189 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 OPN1LWP04000 364 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 NCK1P16333 377 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 TCN1P20061 433 aaPredicted RBP6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 TNFRSF1BP20333 461 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 CEACAM8P31997 349 aaPredicted RBP6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 TIMP3P35625 211 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 RPS3AP61247 264 aaKnown RBP6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 NCALDP61601 193 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 COPZ1P61923 177 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 CEACAM7Q14002 265 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 ZNF239Q16600 458 aaKnown RBP6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 SPATS1Q496A3 300 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 SWT1Q5T5J6 900 aaKnown RBP6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 RIPPLY2Q5TAB7 128 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 HBMQ6B0K9 141 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 TMEM211Q6ICI0 200 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 C6orf89Q6UWU4 347 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 CBLL1Q75N03 491 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 ATG4DQ86TL0 474 aaPredicted RBP6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 RANBP3LQ86VV4 465 aaPredicted RBP6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 TSPYL5Q86VY4 417 aaPredicted RBP6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 ADGRG3Q86Y34 549 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 RBM45Q8IUH3 476 aaKnown RBP6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 CADM2Q8N3J6 435 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 C9orf106Q8NAJ2 232 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 NAXEQ8NCW5 288 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 OR52E4Q8NGH9 312 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 OR6T1Q8NGN1 323 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 OR2V1Q8NHB1 315 aa6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 VANGL1Q8TAA9 524 aaPredicted RBP6.26□□□□□ -1.41
LPCAT3-209ENST00000540060 ITLN2Q8WWU7 325 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms