RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 UMODP07911 640 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 TACR3P29371 465 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 DBPQ10586 325 aaPredicted RBP20.48■□□□□ 0.87
HOMER3-204ENST00000539827 IGFN1Q86VF2 1251 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 NACC2Q96BF6 587 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 MRPS18AQ9NVS2 196 aaKnown RBP20.48■□□□□ 0.87
HOMER3-204ENST00000539827 PMS2P1A4D2B8 440 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 BCL10O95999 233 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 GADD45AP24522 165 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 SLC6A6P31641 620 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 SLC1A3P43003 542 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 SLC9A3P48764 834 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 ETV1P50549 477 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 EFR3AQ14156 821 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 GXYLT1Q4G148 440 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 RTL4Q6ZR62 310 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 NANOGP1Q8N7R0 232 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 OR5L2Q8NGL0 311 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 CCNL2Q96S94 520 aaPredicted RBP20.48■□□□□ 0.87
HOMER3-204ENST00000539827 MGLLQ99685 303 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 FGF20Q9NP95 211 aaPredicted RBP20.48■□□□□ 0.87
HOMER3-204ENST00000539827 LSM2Q9Y333 95 aaKnown RBP20.48■□□□□ 0.87
HOMER3-204ENST00000539827 CUL9Q8IWT3 2517 aa20.47■□□□□ 0.87
HOMER3-204ENST00000539827 C2orf72A6NCS6 295 aa20.47■□□□□ 0.87
HOMER3-204ENST00000539827 FOXD2O60548 495 aaPredicted RBP20.47■□□□□ 0.87
HOMER3-204ENST00000539827 ZFAND5O76080 213 aa20.47■□□□□ 0.87
HOMER3-204ENST00000539827 TGFBR1P36897 503 aa20.47■□□□□ 0.87
HOMER3-204ENST00000539827 NCS1P62166 190 aa20.47■□□□□ 0.87
HOMER3-204ENST00000539827 PSPHP78330 225 aa20.47■□□□□ 0.87
HOMER3-204ENST00000539827 RAB40BQ12829 278 aa20.47■□□□□ 0.87
HOMER3-204ENST00000539827 PCOLCEQ15113 449 aa20.47■□□□□ 0.87
HOMER3-204ENST00000539827 TSTQ16762 297 aaKnown RBP20.47■□□□□ 0.87
HOMER3-204ENST00000539827 NXNL2Q5VZ03 156 aa20.47■□□□□ 0.87
HOMER3-204ENST00000539827 POMZP3Q6PJE2 187 aa20.47■□□□□ 0.87
HOMER3-204ENST00000539827 C10orf53Q8N6V4 93 aa20.47■□□□□ 0.87
HOMER3-204ENST00000539827 OR5W2Q8NH69 310 aa20.47■□□□□ 0.87
HOMER3-204ENST00000539827 DUSP19Q8WTR2 217 aa20.47■□□□□ 0.87
HOMER3-204ENST00000539827 RFKQ969G6 155 aa20.47■□□□□ 0.87
HOMER3-204ENST00000539827 ADAM19Q9H013 955 aa20.47■□□□□ 0.87
HOMER3-204ENST00000539827 CYC1P08574 325 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 ZNF806P0C7X5 589 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 TMEM44Q2T9K0 475 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 NDNFQ8TB73 568 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 BCL7BQ9BQE9 202 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 EDEM2Q9BV94 578 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 MND1Q9BWT6 205 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 HCAR1Q9BXC0 346 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 SLC19A3Q9BZV2 496 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 CMC2Q9NRP2 79 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 WDFY4Q6ZS81 3184 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 ZC3H12DA2A288 527 aaKnown RBP20.46■□□□□ 0.87
HOMER3-204ENST00000539827 ADAM10O14672 748 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 KLF7O75840 302 aaPredicted RBP20.46■□□□□ 0.87
HOMER3-204ENST00000539827 NDUFB2O95178 105 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 PGCP20142 388 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 HTR1FP30939 366 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 INSM1Q01101 510 aaPredicted RBP20.46■□□□□ 0.87
HOMER3-204ENST00000539827 DCAF12Q5T6F0 453 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 RNLSQ5VYX0 342 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 B3GLCTQ6Y288 498 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 ZBTB46Q86UZ6 589 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 OR4F15Q8NGB8 312 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 OR8K3Q8NH51 312 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 HGDQ93099 445 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 ERMAPQ96PL5 475 aaPredicted RBP20.46■□□□□ 0.87
HOMER3-204ENST00000539827 TMEM43Q9BTV4 400 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 ZNF337Q9Y3M9 751 aa20.46■□□□□ 0.87
HOMER3-204ENST00000539827 FRYLO94915 3013 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 IRGMA1A4Y4 181 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 MCIDASD6RGH6 385 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 MYL12BO14950 172 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 CBFA2T3O75081 653 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 WISP1O95388 367 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 GP1BBP13224 206 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 ENDOUP21128 410 aaKnown RBP20.45■□□□□ 0.86
HOMER3-204ENST00000539827 RGS6P49758 472 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 P2RX1P51575 399 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 EGR4Q05215 589 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 CBFBQ13951 182 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 BTBD16Q32M84 506 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 B4GALNT2Q8NHY0 566 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 OPALINQ96PE5 141 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 DEFB126Q9BYW3 111 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 STRADBQ9C0K7 418 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 FN3KQ9H479 309 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 BAIAP2Q9UQB8 552 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 PCNX3Q9H6A9 2034 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 LOC102723996A0A087X1L8 192 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 AIREO43918 545 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 CELA2AP08217 269 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 HK1P19367 917 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 NOS3P29474 1203 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 SPHARQ15513 63 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 C3orf38Q5JPI3 329 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 ZNF362Q5T0B9 420 aaPredicted RBP20.45■□□□□ 0.86
HOMER3-204ENST00000539827 OR5M10Q6IEU7 315 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 ZNF517Q6ZMY9 492 aaPredicted RBP20.45■□□□□ 0.86
HOMER3-204ENST00000539827 RAB11FIP2Q7L804 512 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 PROKR2Q8NFJ6 384 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 OR51E2Q9H255 320 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms