RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 NANOGQ9H9S0 305 aa4.64□□□□□ -1.67
TRAV11-201ENST00000539512 APMAPQ9HDC9 416 aa4.64□□□□□ -1.67
TRAV11-201ENST00000539512 RALGAPA1Q6GYQ0 2036 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 AGRNO00468 2067 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 C15orf38-AP3S2A0A0A6YYH1 394 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 A0A0J9YXY3 114 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 LRP5LA4QPB2 252 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 HPNP05981 417 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 IQCF3P0C7M6 154 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 ZNF44P15621 663 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 HNF1AP20823 631 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 RDXP35241 583 aaKnown RBP4.63□□□□□ -1.67
TRAV11-201ENST00000539512 PKNOX1P55347 436 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 SELENOTP62341 195 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 C2orf83Q53S99 150 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 SAMD4BQ5PRF9 694 aaKnown RBP4.63□□□□□ -1.67
TRAV11-201ENST00000539512 TMEM123Q8N131 208 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 RNF175Q8N4F7 328 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 ZNF540Q8NDQ6 660 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 EFHD2Q96C19 240 aaPredicted RBP4.63□□□□□ -1.67
TRAV11-201ENST00000539512 NUS1Q96E22 293 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 ARHGDIGQ99819 225 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 POPDC2Q9HBU9 364 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 UFSP2Q9NUQ7 469 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 SIGLEC8Q9NYZ4 499 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 PIPOXQ9P0Z9 390 aa4.63□□□□□ -1.67
TRAV11-201ENST00000539512 A0A1B0GUS0 222 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 GPR89AB7ZAQ6 455 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 ARPC3O15145 178 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 MTX2O75431 263 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 TIMP1P01033 207 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 P04436 131 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 GPR89BP0CG08 455 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 RBMY1CP0DJD4 496 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 ELK1P19419 428 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 ATP6V1B2P21281 511 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 GCAP28676 217 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 LAP3P28838 519 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 RPL13AP40429 203 aaKnown RBP4.62□□□□□ -1.67
TRAV11-201ENST00000539512 SSR1P43307 286 aaKnown RBP4.62□□□□□ -1.67
TRAV11-201ENST00000539512 BIDP55957 195 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 SPIBQ01892 262 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 MAP2K1Q02750 393 aaPredicted RBP4.62□□□□□ -1.67
TRAV11-201ENST00000539512 HERPUD1Q15011 391 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 NSDHLQ15738 373 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 CCDC152Q4G0S7 254 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 C1orf146Q5VVC0 180 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 KLHDC3Q9BQ90 382 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 RAB34Q9BZG1 259 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 ABCB10Q9NRK6 738 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 ANAPC11Q9NYG5 84 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 NYAP2Q9P242 653 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 RPS6KB2Q9UBS0 482 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 TMCO1Q9UM00 188 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 ERVW-1Q9UQF0 538 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 ASF1AQ9Y294 204 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 UGT2A1Q9Y4X1 527 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 KDRP35968 1356 aa4.62□□□□□ -1.67
TRAV11-201ENST00000539512 TP53BP1Q12888 1972 aaPredicted RBP4.62□□□□□ -1.67
TRAV11-201ENST00000539512 PCP4L1A6NKN8 68 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 RGS16O15492 202 aaPredicted RBP4.61□□□□□ -1.67
TRAV11-201ENST00000539512 UGT1A9O60656 530 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 PFKFB2O60825 505 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 AP2A1O95782 977 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 DBTP11182 482 aaKnown RBP4.61□□□□□ -1.67
TRAV11-201ENST00000539512 COX5AP20674 150 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 FUT3P21217 361 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 COX7A1P24310 79 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 MMP11P24347 488 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 HMGB2P26583 209 aaKnown RBP4.61□□□□□ -1.67
TRAV11-201ENST00000539512 CD1BP29016 333 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 CALCRP30988 508 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 FGL1Q08830 312 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 ASPHQ12797 758 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 PDK3Q15120 406 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 DPYSL2Q16555 572 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 HSDL2Q6YN16 418 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 FTMTQ8N4E7 242 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 UCN3Q969E3 161 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 RPRD1AQ96P16 312 aaPredicted RBP4.61□□□□□ -1.67
TRAV11-201ENST00000539512 RBM14Q96PK6 669 aaKnown RBP4.61□□□□□ -1.67
TRAV11-201ENST00000539512 HIST1H4GQ99525 98 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 TRAF3IP3Q9Y228 551 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 SLCO1B1Q9Y6L6 691 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 CDH10Q9Y6N8 788 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 V9GY05 133 aa4.61□□□□□ -1.67
TRAV11-201ENST00000539512 PRRG1O14668 218 aa4.6□□□□□ -1.67
TRAV11-201ENST00000539512 MED7O43513 233 aa4.6□□□□□ -1.67
TRAV11-201ENST00000539512 SUPT7LO94864 414 aa4.6□□□□□ -1.67
TRAV11-201ENST00000539512 KLF8O95600 359 aaPredicted RBP4.6□□□□□ -1.67
TRAV11-201ENST00000539512 SHMT2P34897 504 aa4.6□□□□□ -1.67
TRAV11-201ENST00000539512 RFC4P35249 363 aa4.6□□□□□ -1.67
TRAV11-201ENST00000539512 APOC4P55056 127 aa4.6□□□□□ -1.67
TRAV11-201ENST00000539512 NCBP1Q09161 790 aaKnown RBP4.6□□□□□ -1.67
TRAV11-201ENST00000539512 ANKDD1AQ495B1 522 aa4.6□□□□□ -1.67
TRAV11-201ENST00000539512 PMF1Q6P1K2 205 aa4.6□□□□□ -1.67
TRAV11-201ENST00000539512 NLRP9Q7RTR0 991 aa4.6□□□□□ -1.67
TRAV11-201ENST00000539512 ZNF571Q7Z3V5 609 aaPredicted RBP4.6□□□□□ -1.67
TRAV11-201ENST00000539512 PPP1R42Q7Z4L9 355 aa4.6□□□□□ -1.67
TRAV11-201ENST00000539512 CCDC71LQ8N9Z2 235 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms