RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 NPDC1Q9NQX5 325 aaPredicted RBP14.11□□□□□ -0.15
RPAIN-206ENST00000539417 FLNBO75369 2602 aaKnown RBP14.1□□□□□ -0.15
RPAIN-206ENST00000539417 HCFC1P51610 2035 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 HSPB2A8KAH6 182 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 CYSRT1A8MQ03 144 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 SERPINB7O75635 380 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 TNFSF13O75888 250 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 DCTN3O75935 186 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 TNFRSF1BP20333 461 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 ENPP1P22413 925 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 CTSSP25774 331 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 KCNJ5P48544 419 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 GSK3BP49841 420 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 CARD18P57730 90 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 RPS3AP61247 264 aaKnown RBP14.1□□□□□ -0.15
RPAIN-206ENST00000539417 SLC25A3Q00325 362 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 SF3B4Q15427 424 aaKnown RBP eCLIP14.1□□□□□ -0.155e-17■■■■■ 28.1
RPAIN-206ENST00000539417 HSPB2Q16082 182 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 SYT14P1Q58G82 188 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 OR2T12Q8NG77 320 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 TM9SF2Q99805 663 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 ARHGDIGQ99819 225 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 HOPXQ9BPY8 73 aaPredicted RBP14.1□□□□□ -0.15
RPAIN-206ENST00000539417 CACYBPQ9HB71 228 aaKnown RBP14.1□□□□□ -0.15
RPAIN-206ENST00000539417 CHRNA9Q9UGM1 479 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 TAGLN3Q9UI15 199 aa14.1□□□□□ -0.15
RPAIN-206ENST00000539417 INTS1Q8N201 2190 aaKnown RBP14.09□□□□□ -0.15
RPAIN-206ENST00000539417 LGI1O95970 557 aa14.09□□□□□ -0.15
RPAIN-206ENST00000539417 KIR2DL2P43627 348 aaPredicted RBP14.09□□□□□ -0.15
RPAIN-206ENST00000539417 POLR2HP52434 150 aaKnown RBP14.09□□□□□ -0.15
RPAIN-206ENST00000539417 GUSBP1Q15486 140 aa14.09□□□□□ -0.15
RPAIN-206ENST00000539417 ZNF239Q16600 458 aaKnown RBP14.09□□□□□ -0.15
RPAIN-206ENST00000539417 SP5Q6BEB4 398 aaPredicted RBP14.09□□□□□ -0.15
RPAIN-206ENST00000539417 ZNF787Q6DD87 383 aa14.09□□□□□ -0.15
RPAIN-206ENST00000539417 WBP2NLQ6ICG8 309 aa14.09□□□□□ -0.15
RPAIN-206ENST00000539417 VWA1Q6PCB0 445 aa14.09□□□□□ -0.15
RPAIN-206ENST00000539417 PATL1Q86TB9 770 aaKnown RBP14.09□□□□□ -0.15
RPAIN-206ENST00000539417 RNF148Q8N7C7 305 aa14.09□□□□□ -0.15
RPAIN-206ENST00000539417 SERINC1Q9NRX5 453 aa14.09□□□□□ -0.15
RPAIN-206ENST00000539417 STOML1Q9UBI4 398 aa14.09□□□□□ -0.15
RPAIN-206ENST00000539417 ABCD2Q9UBJ2 740 aa14.09□□□□□ -0.15
RPAIN-206ENST00000539417 ZNF175Q9Y473 711 aa14.09□□□□□ -0.15
RPAIN-206ENST00000539417 A0A1W2PNV4 684 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 ELOVL7A1L3X0 281 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 PRORSD1PA6NEY8 169 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 ZNF814B7Z6K7 855 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 TFPIP10646 304 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 IMPDH2P12268 514 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 SLC7A1P30825 629 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 DIO1P49895 249 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 SIRPAP78324 504 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 MYBPHQ13203 477 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 SNTB1Q13884 538 aaKnown RBP14.08□□□□□ -0.16
RPAIN-206ENST00000539417 VEZF1Q14119 521 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 NRF1Q16656 503 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 ZSWIM7Q19AV6 140 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 ATG4DQ86TL0 474 aaPredicted RBP14.08□□□□□ -0.16
RPAIN-206ENST00000539417 SLC30A8Q8IWU4 369 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 FAM156AQ8NDB6 213 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 OR6T1Q8NGN1 323 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 VANGL1Q8TAA9 524 aaPredicted RBP14.08□□□□□ -0.16
RPAIN-206ENST00000539417 BCAS4Q8TDM0 211 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 ABHD3Q8WU67 409 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 ARMC7Q9H6L4 198 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 TMEM181Q9P2C4 612 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 KLF2Q9Y5W3 355 aaPredicted RBP14.08□□□□□ -0.16
RPAIN-206ENST00000539417 DCHS2Q6V1P9 2916 aa14.08□□□□□ -0.16
RPAIN-206ENST00000539417 A0A1B0GWA3 101 aa14.07□□□□□ -0.16
RPAIN-206ENST00000539417 NDUFAB1O14561 156 aa14.07□□□□□ -0.16
RPAIN-206ENST00000539417 SMAD9O15198 467 aaKnown RBP14.07□□□□□ -0.16
RPAIN-206ENST00000539417 RAMP1O60894 148 aa14.07□□□□□ -0.16
RPAIN-206ENST00000539417 FESP07332 822 aa14.07□□□□□ -0.16
RPAIN-206ENST00000539417 T-ENOLP0DO92 83 aa14.07□□□□□ -0.16
RPAIN-206ENST00000539417 NCK1P16333 377 aa14.07□□□□□ -0.16
RPAIN-206ENST00000539417 PTNP21246 168 aa14.07□□□□□ -0.16
RPAIN-206ENST00000539417 KDELR2P33947 212 aa14.07□□□□□ -0.16
RPAIN-206ENST00000539417 RGS8P57771 180 aaPredicted RBP14.07□□□□□ -0.16
RPAIN-206ENST00000539417 LRRC23Q53EV4 343 aaPredicted RBP14.07□□□□□ -0.16
RPAIN-206ENST00000539417 INTS11Q5TA45 600 aaKnown RBP14.07□□□□□ -0.16
RPAIN-206ENST00000539417 ERICH5Q6P6B1 374 aa14.07□□□□□ -0.16
RPAIN-206ENST00000539417 TMPPEQ6ZT21 453 aa14.07□□□□□ -0.16
RPAIN-206ENST00000539417 BTLAQ7Z6A9 289 aa14.07□□□□□ -0.16
RPAIN-206ENST00000539417 ARPINQ7Z6K5 226 aa14.07□□□□□ -0.16
RPAIN-206ENST00000539417 SLC35B4Q969S0 331 aa14.07□□□□□ -0.16
RPAIN-206ENST00000539417 STARD4Q96DR4 205 aa14.07□□□□□ -0.16
RPAIN-206ENST00000539417 PRRG4Q9BZD6 226 aa14.07□□□□□ -0.16
RPAIN-206ENST00000539417 ALG2Q9H553 416 aa14.07□□□□□ -0.16
RPAIN-206ENST00000539417 KCNJ16Q9NPI9 418 aa14.07□□□□□ -0.16
RPAIN-206ENST00000539417 ZNF629Q9UEG4 869 aaPredicted RBP14.07□□□□□ -0.16
RPAIN-206ENST00000539417 ING1Q9UK53 422 aaPredicted RBP14.07□□□□□ -0.16
RPAIN-206ENST00000539417 GJE1A6NN92 205 aa14.06□□□□□ -0.16
RPAIN-206ENST00000539417 DVL2O14641 736 aa14.06□□□□□ -0.16
RPAIN-206ENST00000539417 SYNGR4O95473 234 aa14.06□□□□□ -0.16
RPAIN-206ENST00000539417 THY1P04216 161 aa14.06□□□□□ -0.16
RPAIN-206ENST00000539417 UQCRBP14927 111 aa14.06□□□□□ -0.16
RPAIN-206ENST00000539417 HTR3AP46098 478 aa14.06□□□□□ -0.16
RPAIN-206ENST00000539417 COPZ1P61923 177 aa14.06□□□□□ -0.16
RPAIN-206ENST00000539417 EGR4Q05215 589 aa14.06□□□□□ -0.16
RPAIN-206ENST00000539417 KRT72Q14CN4 511 aa14.06□□□□□ -0.16
RPAIN-206ENST00000539417 OR1Q1Q15612 314 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms