RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 MYZAPP0CAP1 466 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 TFPIP10646 304 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 KHKP50053 298 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 ABCE1P61221 599 aaKnown RBP11.03□□□□□ -0.64
VAMP1-206ENST00000538970 CHI3L2Q15782 390 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 SPANXN4Q5MJ08 99 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 ANXA8L1Q5VT79 327 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 GRINAQ7Z429 371 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 VPS37AQ8NEZ2 397 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 ZNF563Q8TA94 476 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 PIGXQ8TBF5 258 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 XAGE5Q8WWM1 108 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 APH1AQ96BI3 265 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 ZHX1-C8orf76Q96EF9 292 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 NEURL3Q96EH8 262 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 ARL5BQ96KC2 179 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 SORT1Q99523 831 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 C20orf27Q9GZN8 174 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 ALG2Q9H553 416 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 BARX1Q9HBU1 254 aaPredicted RBP11.03□□□□□ -0.64
VAMP1-206ENST00000538970 EXOSC3Q9NQT5 275 aaKnown RBP11.03□□□□□ -0.64
VAMP1-206ENST00000538970 FAIMQ9NVQ4 179 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 MALT1Q9UDY8 824 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 GDF2Q9UK05 429 aaPredicted RBP11.03□□□□□ -0.64
VAMP1-206ENST00000538970 NOSIPQ9Y314 301 aaKnown RBP11.03□□□□□ -0.64
VAMP1-206ENST00000538970 HDGFL3Q9Y3E1 203 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 RAP2CQ9Y3L5 183 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 FREM1Q5H8C1 2179 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 PRAMEF27A3QJZ7 478 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 CLDN24A6NM45 220 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 GPR171O14626 319 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 BIRC5O15392 142 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 ADAM11O75078 769 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 CPSF4O95639 269 aaKnown RBP11.02□□□□□ -0.65
VAMP1-206ENST00000538970 C1QCP02747 245 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 FKBP2P26885 142 aaKnown RBP11.02□□□□□ -0.65
VAMP1-206ENST00000538970 NTF4P34130 210 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 RYKP34925 604 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 RPL14P50914 215 aaKnown RBP11.02□□□□□ -0.65
VAMP1-206ENST00000538970 SLC16A1P53985 500 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 HPCAP84074 193 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 SPOCK1Q08629 439 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 CASP8Q14790 479 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 DPY19L1Q2PZI1 675 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 HMGN2P46Q86SG4 172 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 LSRQ86X29 649 aaPredicted RBP11.02□□□□□ -0.65
VAMP1-206ENST00000538970 ADGRG3Q86Y34 549 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 LRRC34Q8IZ02 419 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 UBE2J2Q8N2K1 259 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 ARFGAP2Q8N6H7 521 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 ZG16BQ96DA0 208 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 DNAJA3Q96EY1 480 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 RADILQ96JH8 1075 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 HS6ST2Q96MM7 605 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 SLC35A5Q9BS91 424 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 OR11A1Q9GZK7 315 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 MARCOQ9UEW3 520 aaPredicted RBP11.02□□□□□ -0.65
VAMP1-206ENST00000538970 HAO1Q9UJM8 370 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 B3GALT5Q9Y2C3 310 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.02□□□□□ -0.65
VAMP1-206ENST00000538970 SLC25A15Q9Y619 301 aa11.02□□□□□ -0.65
VAMP1-206ENST00000538970 E9PBE3 544 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 HMGN4O00479 90 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 AP3D1O14617 1153 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 CD5LO43866 347 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 SNUPNO95149 360 aaKnown RBP11.01□□□□□ -0.65
VAMP1-206ENST00000538970 TP53P04637 393 aaPredicted RBP11.01□□□□□ -0.65
VAMP1-206ENST00000538970 DHRS4L1P0CG22 281 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 LBPP18428 481 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 PTNP21246 168 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 CHI3L1P36222 383 aaPredicted RBP11.01□□□□□ -0.65
VAMP1-206ENST00000538970 SLC1A6P48664 564 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 CLK1P49759 484 aaKnown RBP11.01□□□□□ -0.65
VAMP1-206ENST00000538970 CLNS1AP54105 237 aaKnown RBP11.01□□□□□ -0.65
VAMP1-206ENST00000538970 KCNJ10P78508 379 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 CHRNEQ04844 493 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 NRF1Q16656 503 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 KRT71Q3SY84 523 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 FAM174BQ3ZCQ3 159 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 GPAT3Q53EU6 434 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 C11orf71Q6IPW1 123 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 WDR93Q6P2C0 686 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 TMEM108Q6UXF1 575 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 CCDC103Q8IW40 242 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 PIAS4Q8N2W9 510 aaPredicted RBP11.01□□□□□ -0.65
VAMP1-206ENST00000538970 OR52N5Q8NH56 324 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 CNOT9Q92600 299 aaKnown RBP11.01□□□□□ -0.65
VAMP1-206ENST00000538970 CCDC115Q96NT0 180 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 NUF2Q9BZD4 464 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 SSU72Q9NP77 194 aaKnown RBP11.01□□□□□ -0.65
VAMP1-206ENST00000538970 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.01□□□□□ -0.65
VAMP1-206ENST00000538970 ASB6Q9NWX5 421 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 TAS2R16Q9NYV7 291 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 BTNL2Q9UIR0 455 aa11.01□□□□□ -0.65
VAMP1-206ENST00000538970 A0A1W2PR80 420 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 CIB4A0PJX0 185 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 AGAP5A6NIR3 686 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 CCT8L1PA6NM43 557 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 E7EQL1 145 aa11□□□□□ -0.65
VAMP1-206ENST00000538970 PDLIM1O00151 329 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms