RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 PNMTP11086 282 aa21.22■□□□□ 0.99
TMEM260-202ENST00000538838 FCGR1AP12314 374 aa21.22■□□□□ 0.99
TMEM260-202ENST00000538838 FASP25445 335 aa21.22■□□□□ 0.99
TMEM260-202ENST00000538838 ELK4P28324 431 aa21.22■□□□□ 0.99
TMEM260-202ENST00000538838 ATP6AP1Q15904 470 aa21.22■□□□□ 0.99
TMEM260-202ENST00000538838 ZNF324BQ6AW86 544 aaPredicted RBP21.22■□□□□ 0.99
TMEM260-202ENST00000538838 HMBOX1Q6NT76 420 aa21.22■□□□□ 0.99
TMEM260-202ENST00000538838 C3orf33Q6P1S2 294 aa21.22■□□□□ 0.99
TMEM260-202ENST00000538838 LILRA2Q8N149 483 aa21.22■□□□□ 0.99
TMEM260-202ENST00000538838 NEIL3Q8TAT5 605 aa21.22■□□□□ 0.99
TMEM260-202ENST00000538838 SMPDL3BQ92485 455 aa21.22■□□□□ 0.99
TMEM260-202ENST00000538838 PKP2Q99959 881 aa21.22■□□□□ 0.99
TMEM260-202ENST00000538838 EXO5Q9H790 373 aa21.22■□□□□ 0.99
TMEM260-202ENST00000538838 AGPAT4Q9NRZ5 378 aa21.22■□□□□ 0.99
TMEM260-202ENST00000538838 U3KQV3 271 aa21.22■□□□□ 0.99
TMEM260-202ENST00000538838 A0A1W2PRQ8 180 aa21.21■□□□□ 0.99
TMEM260-202ENST00000538838 GNGT2O14610 69 aa21.21■□□□□ 0.99
TMEM260-202ENST00000538838 LDLRP01130 860 aa21.21■□□□□ 0.99
TMEM260-202ENST00000538838 IGHG3P01860 377 aa21.21■□□□□ 0.99
TMEM260-202ENST00000538838 SPTA1P02549 2419 aa21.21■□□□□ 0.99
TMEM260-202ENST00000538838 OPN1LWP04000 364 aa21.21■□□□□ 0.99
TMEM260-202ENST00000538838 IST1P53990 364 aa21.21■□□□□ 0.99
TMEM260-202ENST00000538838 SELENBP1Q13228 472 aa21.21■□□□□ 0.99
TMEM260-202ENST00000538838 DGCR6Q14129 220 aa21.21■□□□□ 0.99
TMEM260-202ENST00000538838 RCN1Q15293 331 aa21.21■□□□□ 0.99
TMEM260-202ENST00000538838 LINC00114Q6XXX2 140 aa21.21■□□□□ 0.99
TMEM260-202ENST00000538838 AMIGO2Q86SJ2 522 aa21.21■□□□□ 0.99
TMEM260-202ENST00000538838 P3H2Q8IVL5 708 aa21.21■□□□□ 0.99
TMEM260-202ENST00000538838 SLC7A13Q8TCU3 470 aa21.21■□□□□ 0.99
TMEM260-202ENST00000538838 MPP4Q96JB8 637 aa21.21■□□□□ 0.99
TMEM260-202ENST00000538838 REEP1Q9H902 201 aa21.21■□□□□ 0.99
TMEM260-202ENST00000538838 SAMHD1Q9Y3Z3 626 aaKnown RBP21.21■□□□□ 0.99
TMEM260-202ENST00000538838 IGKV1D-42A0A075B6H8 117 aa21.2■□□□□ 0.98
TMEM260-202ENST00000538838 ZC3H12DA2A288 527 aaKnown RBP21.2■□□□□ 0.98
TMEM260-202ENST00000538838 TNFRSF11BO00300 401 aa21.2■□□□□ 0.98
TMEM260-202ENST00000538838 HSF1Q00613 529 aa21.2■□□□□ 0.98
TMEM260-202ENST00000538838 EXOC3L2Q2M3D2 409 aa21.2■□□□□ 0.98
TMEM260-202ENST00000538838 DCST1Q5T197 706 aa21.2■□□□□ 0.98
TMEM260-202ENST00000538838 FUZQ9BT04 418 aa21.2■□□□□ 0.98
TMEM260-202ENST00000538838 ZNF426Q9BUY5 554 aa21.2■□□□□ 0.98
TMEM260-202ENST00000538838 OR11A1Q9GZK7 315 aa21.2■□□□□ 0.98
TMEM260-202ENST00000538838 ANKRD19PQ9H560 264 aa21.2■□□□□ 0.98
TMEM260-202ENST00000538838 SERINC1Q9NRX5 453 aa21.2■□□□□ 0.98
TMEM260-202ENST00000538838 ASF1BQ9NVP2 202 aa21.2■□□□□ 0.98
TMEM260-202ENST00000538838 SPRR3Q9UBC9 169 aa21.2■□□□□ 0.98
TMEM260-202ENST00000538838 HCN1O60741 890 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 CHMP24386 653 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 SHC1P29353 583 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 SFTPDP35247 375 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 LIMS1P48059 325 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 STARP49675 285 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 UGT2B15P54855 530 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 SMIM11AP58511 58 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 LSM11P83369 360 aaKnown RBP eCLIP21.19■□□□□ 0.98
TMEM260-202ENST00000538838 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.19■□□□□ 0.98
TMEM260-202ENST00000538838 PODNL1Q6PEZ8 512 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 OR4C15Q8NGM1 316 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 FAR1Q8WVX9 515 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 DNAJA3Q96EY1 480 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 GPR137Q96N19 417 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 SEMA6AQ9H2E6 1030 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 NTN4Q9HB63 628 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 PLSCR2Q9NRY7 297 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 TNFRSF10DQ9UBN6 386 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 KALRNO60229 2985 aa21.19■□□□□ 0.98
TMEM260-202ENST00000538838 TTLL8A6PVC2 850 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 KPNA4O00629 521 aaPredicted RBP21.18■□□□□ 0.98
TMEM260-202ENST00000538838 PIP5K1CO60331 668 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 BAG2O95816 211 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 BMP7P18075 431 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 POU3F2P20265 443 aaPredicted RBP21.18■□□□□ 0.98
TMEM260-202ENST00000538838 EGR4Q05215 589 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 LAPTM4AQ15012 233 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 SEC23BQ15437 767 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 TBPL2Q6SJ96 375 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 TMEM179BQ7Z7N9 219 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 TMEM239Q8WW34 195 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 SPIN1Q9Y657 262 aaPredicted RBP21.18■□□□□ 0.98
TMEM260-202ENST00000538838 KIAA1549Q9HCM3 1950 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 A0A087WUU8 490 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 ZNHIT1O43257 154 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 GCKP35557 465 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 TDGF1P3P51864 188 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 SYT14P1Q58G82 188 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 TTC33Q6PID6 262 aaPredicted RBP21.18■□□□□ 0.98
TMEM260-202ENST00000538838 PQLC1Q8N2U9 271 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 PFN4Q8NHR9 129 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 ACOT11Q8WXI4 607 aaPredicted RBP21.18■□□□□ 0.98
TMEM260-202ENST00000538838 ABTB1Q969K4 478 aaPredicted RBP21.18■□□□□ 0.98
TMEM260-202ENST00000538838 ALPK1Q96QP1 1244 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 EPYCQ99645 322 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 TMEM43Q9BTV4 400 aa21.18■□□□□ 0.98
TMEM260-202ENST00000538838 ZFYVE26Q68DK2 2539 aa21.17■□□□□ 0.98
TMEM260-202ENST00000538838 A8MVM7 634 aa21.17■□□□□ 0.98
TMEM260-202ENST00000538838 ZNF208O43345 1280 aa21.17■□□□□ 0.98
TMEM260-202ENST00000538838 E2F6O75461 281 aa21.17■□□□□ 0.98
TMEM260-202ENST00000538838 TFPIP10646 304 aa21.17■□□□□ 0.98
TMEM260-202ENST00000538838 RBM34P42696 430 aaKnown RBP21.17■□□□□ 0.98
TMEM260-202ENST00000538838 LHX2P50458 406 aa21.17■□□□□ 0.98
TMEM260-202ENST00000538838 HMGA2P52926 109 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms