RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 PRSS27Q9BQR3 290 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 RBM4Q9BWF3 364 aaKnown RBP12.84□□□□□ -0.35
CD4-208ENST00000538827 ORC6Q9Y5N6 252 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 CSAG2Q9Y5P2 127 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 TEP1Q99973 2627 aaKnown RBP12.84□□□□□ -0.35
CD4-208ENST00000538827 A0A087WUU8 490 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 TMED7-TICAM2A0A0A6YYA0 188 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 LRRC3CA6NJW4 275 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 MKRN2OSH3BPM6 223 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 CDK2AP1O14519 115 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 TRIM3O75382 744 aaPredicted RBP12.83□□□□□ -0.36
CD4-208ENST00000538827 PNMTP11086 282 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 POU2F1P14859 743 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 PRKCAP17252 672 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 IGFBP5P24593 272 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 CXCR1P25024 350 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 DPP4P27487 766 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 GDF1P27539 372 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 ALDH3A2P51648 485 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 POLR2HP52434 150 aaKnown RBP12.83□□□□□ -0.36
CD4-208ENST00000538827 TBR1Q16650 682 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 PLPPR5Q32ZL2 321 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 SWT1Q5T5J6 900 aaKnown RBP12.83□□□□□ -0.36
CD4-208ENST00000538827 RAET1LQ5VY80 246 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 TIGD3Q6B0B8 471 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 GRINAQ7Z429 371 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 GALNT5Q7Z7M9 940 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 ATG4DQ86TL0 474 aaPredicted RBP12.83□□□□□ -0.36
CD4-208ENST00000538827 SULF2Q8IWU5 870 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 NRMQ8IXM6 262 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 ZADH2Q8N4Q0 377 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 PACRGLQ8N7B6 248 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 TMEM178AQ8NBL3 297 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 OR5M1Q8NGP8 315 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 HAS2Q92819 552 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 GTPBP3Q969Y2 492 aaKnown RBP12.83□□□□□ -0.36
CD4-208ENST00000538827 RELTQ969Z4 430 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 FAM46AQ96IP4 442 aaKnown RBP12.83□□□□□ -0.36
CD4-208ENST00000538827 MPP4Q96JB8 637 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 FRMD6Q96NE9 622 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 GNRHR2Q96P88 292 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 SMAD5Q99717 465 aaKnown RBP12.83□□□□□ -0.36
CD4-208ENST00000538827 FUZQ9BT04 418 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 ZNF556Q9HAH1 456 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 C8orf4Q9NR00 106 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 KRT84Q9NSB2 600 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 B4GALT7Q9UBV7 327 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 OSGIN1Q9UJX0 560 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 RPH3AQ9Y2J0 694 aaPredicted RBP12.83□□□□□ -0.36
CD4-208ENST00000538827 C15orf41Q9Y2V0 281 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 TMED7Q9Y3B3 224 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 MED31Q9Y3C7 131 aa12.83□□□□□ -0.36
CD4-208ENST00000538827 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 FAM166BA8MTA8 275 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 SUSD5O60279 629 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 HPRP00739 348 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 IFI30P13284 250 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 ANXA8P13928 327 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 GCKP35557 465 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 IFNGR2P38484 337 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 RBM34P42696 430 aaKnown RBP12.82□□□□□ -0.36
CD4-208ENST00000538827 GPR4P46093 362 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 TNFSF10P50591 281 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 HMGA2P52926 109 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 DSCR4P56555 118 aaPredicted RBP12.82□□□□□ -0.36
CD4-208ENST00000538827 LSM11P83369 360 aaKnown RBP eCLIP12.82□□□□□ -0.36
CD4-208ENST00000538827 CRYZQ08257 329 aaKnown RBP12.82□□□□□ -0.36
CD4-208ENST00000538827 PGBD2Q6P3X8 592 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 MBOAT2Q6ZWT7 520 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 LINC00471Q8N535 108 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 ATP6V1C2Q8NEY4 427 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 EXTL1Q92935 676 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 DTNBP1Q96EV8 351 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 SCMH1Q96GD3 660 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 HS6ST2Q96MM7 605 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 FEVQ99581 238 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 NPAS1Q99742 590 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 OSBPL10Q9BXB5 764 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 RIBC2Q9H4K1 309 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 ZFP64Q9NPA5 681 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 USE1Q9NZ43 259 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 MGAT4BQ9UQ53 548 aa12.82□□□□□ -0.36
CD4-208ENST00000538827 A0A087WUJ7 227 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 A0A087WZY1 265 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 TMEM72A0PK05 275 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 ARRDC5A6NEK1 342 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 ENO4A6NNW6 628 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 KLRC4-KLRK1H3BQV0 150 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 MITFO75030 526 aaPredicted RBP12.81□□□□□ -0.36
CD4-208ENST00000538827 TRAPPC6AO75865 159 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 ADAP00813 363 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 ZNF26P17031 533 aaPredicted RBP12.81□□□□□ -0.36
CD4-208ENST00000538827 CBLP22681 906 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 HTR3AP46098 478 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 CD97P48960 835 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 DAPP51397 102 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 PPP2R2BQ00005 443 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 ZIK1Q3SY52 487 aaPredicted RBP12.81□□□□□ -0.36
CD4-208ENST00000538827 PPP4R4Q6NUP7 873 aa12.81□□□□□ -0.36
CD4-208ENST00000538827 FAHD1Q6P587 224 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms