RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 FCGR1BQ92637 280 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 KTI12Q96EK9 354 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-205ENST00000538545 C14orf105Q9NVL8 296 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 FAM171A2A8MVW0 826 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 KDM4EB2RXH2 506 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-205ENST00000538545 NDUFB5O43674 189 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 TSPAN2O60636 221 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 MRPS14O60783 128 aaKnown RBP12.9□□□□□ -0.34
ACTN1-205ENST00000538545 CLPXO76031 633 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 TACR3P29371 465 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 INPP5JQ15735 1006 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-205ENST00000538545 BRIX1Q8TDN6 353 aaKnown RBP12.9□□□□□ -0.34
ACTN1-205ENST00000538545 DUSP19Q8WTR2 217 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 HSPBAP1Q96EW2 488 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 ERMAPQ96PL5 475 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-205ENST00000538545 SECISBP2Q96T21 854 aaKnown RBP12.9□□□□□ -0.34
ACTN1-205ENST00000538545 RACGAP1Q9H0H5 632 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 MARCH7Q9H992 704 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 IER3IP1Q9Y5U9 82 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 RIF1Q5UIP0 2472 aaKnown RBP12.9□□□□□ -0.34
ACTN1-205ENST00000538545 TRBV11-1A0A0K0K1C0 115 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 ELOA3DA6NLF2 546 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-205ENST00000538545 LTBQ06643 244 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 SQSTM1Q13501 440 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 ELOA3BQ3SY89 546 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 MEDAGQ5VYS4 303 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 ZNF367Q7RTV3 350 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 OVCH1Q7RTY7 1134 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 RFLNBQ8N5W9 214 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 SLC37A3Q8NCC5 494 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 ELOA3Q8NG57 546 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 OR52E2Q8NGJ4 325 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 RASD2Q96D21 266 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 TBL1XR1Q9BZK7 514 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 ISG20L2Q9H9L3 353 aaKnown RBP12.89□□□□□ -0.35
ACTN1-205ENST00000538545 KRCC1Q9NPI7 259 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-205ENST00000538545 ENAMQ9NRM1 1142 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 SPIN1Q9Y657 262 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-205ENST00000538545 TMEM200CA6NKL6 621 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 SHISA8B8ZZ34 492 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 DVL2O14641 736 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 F13BP05160 661 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 HIST1H1CP16403 213 aaKnown RBP12.89□□□□□ -0.35
ACTN1-205ENST00000538545 COL5A1P20908 1838 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-205ENST00000538545 RPS5P46782 204 aaKnown RBP12.89□□□□□ -0.35
ACTN1-205ENST00000538545 CTBP2P56545 445 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 ERVK-25P63136 954 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 CYP4Z2PQ8N1L4 340 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 LNX2Q8N448 690 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 CLDN22Q8N7P3 220 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 TMEM99Q8N816 258 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 ZNF527Q8NB42 609 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 ZBTB44Q8NCP5 570 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 FAM71CQ8NEG0 241 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 NFAM1Q8NET5 270 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-205ENST00000538545 TOR1AIP2Q8NFQ8 470 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 PMM1Q92871 262 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 DCLRE1CQ96SD1 692 aaKnown RBP12.89□□□□□ -0.35
ACTN1-205ENST00000538545 TM9SF2Q99805 663 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 DIMT1Q9UNQ2 313 aaKnown RBP12.89□□□□□ -0.35
ACTN1-205ENST00000538545 PRRC2CQ9Y520 2896 aaKnown RBP12.89□□□□□ -0.35
ACTN1-205ENST00000538545 IGLV3-12A0A075B6K2 115 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 CCRL2O00421 344 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 NTN3O00634 580 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-205ENST00000538545 SLC22A1O15245 554 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 IDUAP35475 653 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 RPL4P36578 427 aaKnown RBP12.89□□□□□ -0.35
ACTN1-205ENST00000538545 AQP2P41181 271 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 SERPINB10P48595 397 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 PSMD4P55036 377 aaKnown RBP12.89□□□□□ -0.35
ACTN1-205ENST00000538545 ADCK1Q86TW2 530 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 BMPERQ8N8U9 685 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 METTL21AQ8WXB1 218 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 TP53INP1Q96A56 240 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 TPK1Q9H3S4 243 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 TIMMDC1Q9NPL8 285 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 H2AFY2Q9P0M6 372 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-205ENST00000538545 CFL2Q9Y281 166 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 SLC35A3Q9Y2D2 325 aa12.89□□□□□ -0.35
ACTN1-205ENST00000538545 FREM3P0C091 2139 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 RCBTB2O95199 551 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 INHBBP09529 407 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 MXD1Q05195 221 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 ITGADQ13349 1161 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 ATG4DQ86TL0 474 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-205ENST00000538545 ZNF441Q8N8Z8 693 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 NLGN4YQ8NFZ3 816 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-205ENST00000538545 CEP76Q8TAP6 659 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 MR1Q95460 341 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 SGTBQ96EQ0 304 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 CRELD1Q96HD1 420 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 TSSK2Q96PF2 358 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 MND1Q9BWT6 205 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 ULBP3Q9BZM4 244 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 TGIF2Q9GZN2 237 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 SLIRPQ9GZT3 109 aaKnown RBP12.88□□□□□ -0.35
ACTN1-205ENST00000538545 B3GALT1Q9Y5Z6 326 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 H7C1C5 153 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 HCN1O60741 890 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 SYPP08247 313 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms