RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TMEM31Q5JXX7 168 aa15.69■□□□□ 0.1
SCARB1-205ENST00000538291 SULF2Q8IWU5 870 aa15.69■□□□□ 0.1
SCARB1-205ENST00000538291 SORT1Q99523 831 aa15.69■□□□□ 0.1
SCARB1-205ENST00000538291 NME7Q9Y5B8 376 aa15.69■□□□□ 0.1
SCARB1-205ENST00000538291 GPR176Q14439 515 aa15.69■□□□□ 0.1
SCARB1-205ENST00000538291 TAZQ16635 292 aa15.69■□□□□ 0.1
SCARB1-205ENST00000538291 LRRC26Q2I0M4 334 aa15.69■□□□□ 0.1
SCARB1-205ENST00000538291 DUSP19Q8WTR2 217 aa15.69■□□□□ 0.1
SCARB1-205ENST00000538291 ZFAND2BQ8WV99 257 aa15.69■□□□□ 0.1
SCARB1-205ENST00000538291 PPIL3Q9H2H8 161 aaKnown RBP15.69■□□□□ 0.1
SCARB1-205ENST00000538291 C1GALT1Q9NS00 363 aa15.69■□□□□ 0.1
SCARB1-205ENST00000538291 MDFIC2A0A1B0GVS7 189 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 OR5K3A6NET4 321 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 PTTG1O95997 202 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 F11P03951 625 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 CAPNS1P04632 268 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 S100A7P31151 101 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 CLDN17P56750 224 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 SLC5A12Q1EHB4 618 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 TSSK4Q6SA08 328 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 SLC41A2Q96JW4 573 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 FOXN4Q96NZ1 517 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 THAP10Q9P2Z0 257 aaPredicted RBP15.68■□□□□ 0.1
SCARB1-205ENST00000538291 RFXAPO00287 272 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 PRAF2O60831 178 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 RACK1P63244 317 aaKnown RBP15.68■□□□□ 0.1
SCARB1-205ENST00000538291 FAM69AQ5T7M9 428 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 SBSNQ6UWP8 590 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 CCDC28AQ8IWP9 274 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 ZFAND1Q8TCF1 268 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 ADAMTS14Q8WXS8 1223 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 EGLN2Q96KS0 407 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 METTL9Q9H1A3 318 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 OBP2AQ9NY56 170 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 MYOTQ9UBF9 498 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 LHX6Q9UPM6 363 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 YARS2Q9Y2Z4 477 aaKnown RBP15.68■□□□□ 0.1
SCARB1-205ENST00000538291 CACNG3O60359 315 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 CD79BP40259 229 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 SPOCK1Q08629 439 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 LINC00696Q6ZRV3 163 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 LRRC18Q8N456 261 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 OR2T35Q8NGX2 323 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 FNDC8Q8TC99 324 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 TMEM184BQ9Y519 407 aaPredicted RBP15.68■□□□□ 0.1
SCARB1-205ENST00000538291 CACNG2Q9Y698 323 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 BAZ2AQ9UIF9 1905 aaKnown RBP15.68■□□□□ 0.1
SCARB1-205ENST00000538291 TIMM8AO60220 97 aaPredicted RBP15.68■□□□□ 0.1
SCARB1-205ENST00000538291 F13BP05160 661 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 HBA1P69905 142 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 PDE7AQ13946 482 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 GARNL3Q5VVW2 1013 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 PAPD4Q6PIY7 484 aaKnown RBP15.68■□□□□ 0.1
SCARB1-205ENST00000538291 SLC35F3Q8IY50 421 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 TAAR8Q969N4 342 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 ZNF597Q96LX8 424 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 SORCS2Q96PQ0 1159 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 CCL26Q9Y258 94 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 WDR37Q9Y2I8 494 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 FBXO7Q9Y3I1 522 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 NUBP2Q9Y5Y2 271 aa15.68■□□□□ 0.1
SCARB1-205ENST00000538291 MTHFD2P13995 350 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 STT3AP46977 705 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 ZNF684Q5T5D7 378 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 RNF113BQ8IZP6 322 aaKnown RBP15.67■□□□□ 0.1
SCARB1-205ENST00000538291 OR6F1Q8NGZ6 308 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 NT5C3BQ969T7 300 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 SDSLQ96GA7 329 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 ZNF578Q96N58 590 aaPredicted RBP15.67■□□□□ 0.1
SCARB1-205ENST00000538291 LINC01553A4QN01 128 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 CEBPZOSA8MTT3 80 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 SEC14L2O76054 403 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 ITGB2P05107 769 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 RAB5BP61020 215 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 MSMO1Q15800 293 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 GGTA1PQ4G0N0 100 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 ADGRG5Q8IZF4 528 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 OR4N2Q8NGD1 307 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 SPPL3Q8TCT6 385 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 ATP13A2Q9NQ11 1180 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 BABAM2Q9NXR7 383 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 CNOT2Q9NZN8 540 aaKnown RBP15.67■□□□□ 0.1
SCARB1-205ENST00000538291 ANKRD33BA6NCL7 494 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 TLCD2A6NGC4 264 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 A8MXE2 369 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 GPR137BO60478 399 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 MSL3P1P0C860 447 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 DPP4P27487 766 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 TACR3P29371 465 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 DLSTP36957 453 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 SLC36A2Q495M3 483 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 RNF175Q8N4F7 328 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 HHIPL1Q96JK4 782 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 INTS6Q9UL03 887 aaKnown RBP15.67■□□□□ 0.1
SCARB1-205ENST00000538291 MED16Q9Y2X0 877 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 METTL15A6NJ78 407 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 KLRC4-KLRK1H3BQV0 150 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 DDAH2O95865 285 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 ARAFP10398 606 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 MAOAP21397 527 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms