RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 BCAS1O75363 584 aaPredicted RBP6.59□□□□□ -1.36
MSH6-209ENST00000538136 ANKRD34CP0C6C1 535 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 CT45A8P0DMV1 189 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 CT45A9P0DMV2 189 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 IFNGR2P38484 337 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 CT45A2Q5DJT8 189 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 ERICH5Q6P6B1 374 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 APOOLQ6UXV4 268 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 PLEKHG7Q6ZR37 379 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 TMPPEQ6ZT21 453 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 APLFQ8IW19 511 aaPredicted RBP6.59□□□□□ -1.36
MSH6-209ENST00000538136 APCDD1LQ8NCL9 501 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 OR52E2Q8NGJ4 325 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 ZNF417Q8TAU3 575 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 FAM131CQ96AQ9 280 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 ZNF587Q96SQ5 575 aaPredicted RBP6.59□□□□□ -1.36
MSH6-209ENST00000538136 MRGBPQ9NV56 204 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 TREM2Q9NZC2 230 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 ING1Q9UK53 422 aaPredicted RBP6.59□□□□□ -1.36
MSH6-209ENST00000538136 SLC22A20A6NK97 555 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 PCDH17O14917 1159 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 PPP1R3DO95685 299 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 RECKO95980 971 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 CRYABP02511 175 aaKnown RBP6.58□□□□□ -1.36
MSH6-209ENST00000538136 LCKP06239 509 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 IGFBP1P08833 259 aaPredicted RBP6.58□□□□□ -1.36
MSH6-209ENST00000538136 IMPDH2P12268 514 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 ITGA2P17301 1181 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 IL11P20809 199 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 PYCR1P32322 319 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 POLR2IP36954 125 aaKnown RBP6.58□□□□□ -1.36
MSH6-209ENST00000538136 LSM3P62310 102 aaKnown RBP6.58□□□□□ -1.36
MSH6-209ENST00000538136 Q0VFX4 171 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 PTCHD4Q6ZW05 846 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 ACBD4Q8NC06 268 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 OR2M7Q8NG81 312 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 OR6N2Q8NGY6 317 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 PFN4Q8NHR9 129 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 SAMD8Q96LT4 415 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 RBP7Q96R05 134 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 FAM173AQ9BQD7 235 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 TTTY12Q9BZ98 90 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 KCNN2Q9H2S1 579 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 FN3KQ9H479 309 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 NT5DC2Q9H857 520 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 THUMPD1Q9NXG2 353 aaKnown RBP6.58□□□□□ -1.36
MSH6-209ENST00000538136 SEC14L4Q9UDX3 406 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 IER3IP1Q9Y5U9 82 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 TACC2O95359 2948 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 ISPDA4D126 451 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 A6NLC8 198 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 EI24O14681 340 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 FKBP6O75344 327 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 CCNB2O95067 398 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 FAM157BP0CG42 384 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 ZNF117Q03924 483 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 C19orf57Q0VDD7 668 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 LIN52Q52LA3 116 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 SPATA46Q5T0L3 261 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 ARMC3Q5W041 872 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 OGFOD2Q6N063 350 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 SLC22A25Q6T423 547 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 SLC35D2Q76EJ3 337 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 CLDN22Q8N7P3 220 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 LINC01560Q8TB33 94 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 FKBP10Q96AY3 582 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 TAMM41Q96BW9 452 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 MTERF3Q96E29 417 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 CCDC106Q9BWC9 280 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 MED20Q9H944 212 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 GPR27Q9NS67 375 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 GALNT8Q9NY28 637 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 EXO1Q9UQ84 846 aaKnown RBP6.58□□□□□ -1.36
MSH6-209ENST00000538136 ADAM18Q9Y3Q7 739 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 GMPPBQ9Y5P6 360 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 WIF1Q9Y5W5 379 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 SPIN1Q9Y657 262 aaPredicted RBP6.58□□□□□ -1.36
MSH6-209ENST00000538136 HELZP42694 1942 aaKnown RBP6.58□□□□□ -1.36
MSH6-209ENST00000538136 PLOD2O00469 737 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 SNUPNO95149 360 aaKnown RBP6.58□□□□□ -1.36
MSH6-209ENST00000538136 GCGRP47871 477 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 HLCSP50747 726 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 TRA2BP62995 288 aaKnown RBP6.58□□□□□ -1.36
MSH6-209ENST00000538136 KLRB1Q12918 225 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 MRPL14Q6P1L8 145 aaKnown RBP6.58□□□□□ -1.36
MSH6-209ENST00000538136 LRFN4Q6PJG9 635 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 IZUMO2Q6UXV1 221 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 UEVLDQ8IX04 471 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 PLPP5Q8NEB5 264 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 OR8J2Q8NGG1 315 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 ZNF721Q8TF20 911 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 GIPC3Q8TF64 312 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 GEMIN6Q8WXD5 167 aaKnown RBP6.58□□□□□ -1.36
MSH6-209ENST00000538136 TM4SF19Q96DZ7 209 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 TNFRSF13CQ96RJ3 184 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 EPYCQ99645 322 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 PIGQQ9BRB3 760 aa6.58□□□□□ -1.36
MSH6-209ENST00000538136 PAIP1Q9H074 479 aaKnown RBP6.58□□□□□ -1.36
MSH6-209ENST00000538136 NMNAT1Q9HAN9 279 aaPredicted RBP6.58□□□□□ -1.36
MSH6-209ENST00000538136 PNPLA3Q9NST1 481 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms